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3137 Commits (377e9453caf16417fc4ec8a2b65db1ac4ba0d5ff)

Author SHA1 Message Date
Marius Bakke abe5ffbbfe
gnu: libxml2: Update to 2.9.12.
* gnu/packages/patches/libxml2-parent-pointers.patch,
gnu/packages/patches/libxml2-terminating-newline.patch,
gnu/packages/patches/libxml2-xpath-recursion-limit.patch: New files.
* gnu/packages/patches/python-libxml2-python39-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/xml.scm (libxml2): Update to 2.9.12.
(python-lxml)[source](modules, snippet): New fields.
2021-07-23 17:26:46 +02:00
Marius Bakke 2fa26446a1
gnu: binutils: Update to 2.37.
* gnu/packages/patches/binutils-loongson-workaround.patch: Adjust for upstream
changes.
* gnu/packages/patches/binutils-libiberty-endianness-bug.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/base.scm (binutils): Update to 2.37.
[source](patches): Remove obsolete patch.
2021-07-23 17:26:45 +02:00
Marius Bakke 2a592d43ef
gnu: Perl: Update cross-compilation code.
* gnu/packages/perl.scm (perl)[native-inputs]: Update "perl-cross" to 1.3.6.
[arguments]: Remove obsolete patch.
* gnu/packages/patches/perl-cross.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-07-23 17:26:44 +02:00
Chris Marusich 93a5e89008
gnu: glibc-2.31: Restore patches.
Commit 87961fc965 inadvertently modified the
patch set for glibc-2.31.  This change restores the original patch set.

Fixes: <https://bugs.gnu.org/49516>.

* gnu/packages/base.scm (glibc-2.31) [source]: Use the same patches as glibc,
but replace glibc-hurd-clock_gettime_monotonic.patch with
glibc-2.31-hurd-clock_gettime_monotonic.patch, and add
glibc-hurd-signal-sa-siginfo.patch.
* gnu/packages/patches/glibc-2.31-hurd-clock_gettime_monotonic.patch: Add it.
* gnu/packages/patches/glibc-hurd-signal-sa-siginfo.patch: Add it.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-07-21 16:02:42 -07:00
Nathan Benedetto Proença c3e33474b9
gnu: biber: Update to 2.16.
* gnu/packages/tex.scm (biber): Update to 2.16.
[source]: Remove 'patches'.
[inputs]: Add 'perl-io-string', 'perl-parse-recdescent', and
'perl-unicode-collate' (upstream appears to have fixed the issue
initially mentioned as a comment: recent issue was closed after
telling user to use perl-unicode-collate 1.29, which is the one
available; see <https://github.com/plk/biber/issues/378>.)
* gnu/packages/patches/biber-fix-encoding-write.patch,
gnu/packages/patches/biber-sortinithash.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2021-07-21 15:59:29 +02:00
Ludovic Courtès 0e47fcced4
Merge branch 'master' into core-updates 2021-07-18 19:50:01 +02:00
Justin Veilleux 9cb35c0216
gnu: Add transmission-remote-gtk.
* gnu/packages/bittorrent.scm (transmission-remote-gtk): New variable.
* gnu/packages/patches/transmission-remote-gtk-fix-appstream.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Co-authored-by: Leo Famulari <leo@famulari.name>
2021-07-16 23:53:46 -04:00
Z572 4094d12df1
gnu: Add ark.
* gnu/packages/kde-utils.scm (ark): New variable.
* gnu/packages/patches/ark-skip-xar-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.

Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2021-07-16 00:06:05 -04:00
Maxim Cournoyer c881516d48
gnu: proot: Update to 5.2.0-alpha.
This allows proot to be built for aarch64-linux and armhf-linux.

* gnu/packages/patches/proot-test-fhs.patch: Delete patch.
* gnu/local.mk (dist_patch_DATA): Un-register it.
* gnu/packages/linux.scm: Update to 5.2.0-alpha.
[patches]: Remove field.
[supported-system]: New field.
[tests?]: Disable for ARM-based systems.
[phases]{fix-fhs-assumptions-in-tests, set-shell-file-name}: Combine into...
{patch-sources}: ... this new phase.
{build-manpage}: New phase.
{check}: Add seccomp issue URL in comment.
[native-inputs]: Add coreutils issue URL in comment.  Add pkg-config and
python-docutils.
[inputs]: Add libarchive.
2021-07-12 11:37:40 -04:00
Sarah Morgensen 6f12880a76
gnu: fontconfig: Use (locally) deterministic caching
Make fontconfig use directory contents rather than modification time to
determine cache validity (by pretending that mtime is broken).

* gnu/packages/patches/fontconfig-cache-ignore-mtime.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/fontutils.scm (fontconfig)[source]: Use it.
[arguments]: Unset SOURCE_DATE_EPOCH for tests.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-07-11 18:17:31 +02:00
Ludovic Courtès c823b95825
gnu: coreutils: Patch broken Gnulib tests.
Fixes <https://bugs.gnu.org/49459>.

* gnu/packages/patches/coreutils-gnulib-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/base.scm (coreutils)[source]: Use it.
2021-07-10 01:31:42 +02:00
Zhu Zihao d0ccdd707d
gnu: Add emacs-telega-server.
* gnu/packages/emacs-xyz.scm (emacs-telega-server): New variable.
* gnu/packages/patches/emacs-telega-path-placeholder.patch: New file.
* gnu/package/patches/emacs-telega-patch-server-functions.patch: Remove stale patch.
* gnu/local.mk (dist_patch_DATA): Update accordingly.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-07-09 15:08:04 +02:00
Ludovic Courtès 9bfc4a8187
gnu: python-seaborn: Update to 0.11.1.
* gnu/packages/patches/python-seaborn-kde-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python-xyz.scm (python-seaborn): Use it, and update to
0.11.1.
2021-07-09 11:58:50 +02:00
Ludovic Courtès 145a5a5797
gnu: glibc: Fix cross-compilation to powerpc64le-linux-gnu.
Fixes <https://bugs.gnu.org/49417>.
Reported by Maxime Devos <maximedevos@telenet.be>.

* gnu/packages/patches/glibc-cross-objcopy.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/base.scm (glibc)[source]: Use it.
2021-07-08 00:28:56 +02:00
Leo Famulari 99aecc0988
gnu: VTK 8: Re-fix a build failure with recent versions of freetype.
* gnu/packages/patches/vtk-8-fix-freetypetools-build-failure.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image-processing.scm (vtk-8): Dis-inherit from VTK. Use the
package definition that predated the update to VTK 9, taken from commit
f4dc8ac6df.
2021-07-07 16:50:21 -04:00
Raghav Gururajan aa6e6fb2e9
gnu: Add ytfzf.
* gnu/packages/image-viewers.scm (ytfzf): New variable.

Co-authored-by: jgart <jgart@dismail.de>
2021-07-06 01:27:29 -04:00
Ludovic Courtès 949ed7aae1
gnu: glibc: Fix cross-compilation to aarch64-linux-gnu.
Fixes <https://bugs.gnu.org/49113>.
Reported by Maxime Devos <maximedevos@telenet.be>.

Previously, the cross-compiled libc.so linker script would read:

  OUTPUT_FORMAT(elf64-little)

instead of:

  OUTPUT_FORMAT(elf64-littleaarch64)

This is because glibc 2.33 runs "objdump -f" instead of
"aarch64-linux-gnu-objdump -f" to determine the output format.

* gnu/packages/patches/glibc-cross-objdump.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/base.scm (glibc)[source]: Use it.
2021-07-04 22:10:06 +02:00
Tobias Geerinckx-Rice 243d74579d
gnu: libgrss: Fix CVE-2016-20011.
* gnu/packages/gnome.scm (libgrss): Add patch.
* gnu/packages/patches/libgrss-CVE-2016-2001.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-07-04 03:06:03 +02:00
Efraim Flashner b7d70aeb0b
gnu: tor: Update to 0.4.6.6.
* gnu/packages/tor.scm (tor): Update to 0.4.6.6.
[source]: Remove patch.
* gnu/packages/patches/tor-fix-build-with-gcc-7.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2021-06-30 20:02:32 +03:00
Raghav Gururajan 55b1466303
Revert "gnu: Add ytfzf."
This reverts commit 3fdb2d6792,
as it was accidentally pushed.
2021-06-28 17:56:33 -04:00
LibreMiami 3fdb2d6792
gnu: Add ytfzf.
* gnu/packages/image-viewers.scm (ytfzf): New variable.

Co-authored-by: Raghav Gururajan <rg@raghavgururajan.name>
Co-authored-by: jgart <jgart@dismail.de>
2021-06-28 17:43:24 -04:00
Sarah Morgensen e3e4cbb93f
gnu: Add go-1.16.
Add go@1.16 as a non-default go. Changes from 1.14: Use now-supported GO_LDSO
configuration option for setting the interpreter. Bootstrap with gccgo on
platforms which do not support go-1.4. Fix and re-enable cmd/go script tests.
Fix typo in cgoldflags patch. Break out tests into "check" phase. Remove
references to perl to reduce closure size by ~10%. Set GOCACHE so go doesn't
attempt to access $HOME.

* gnu/packages/patches/go-fix-script-tests.patch: New file.
* local.mk (dist_patch_DATA): Register it.
* gnu/packages/golang.scm (go-1.16): New variable. Use the patch.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-06-28 22:19:50 +03:00
Timotej Lazar 076bbc440f
gnu: Add oneko.
* gnu/packages/toys.scm (oneko): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-06-28 20:46:14 +02:00
Tobias Geerinckx-Rice bf9dc75682
gnu: connman: Update to 1.40.
* gnu/packages/connman.scm (connman): Update to 1.40.
[source]: Remove upstreamed patch.
[inputs]: Add lz4, rather than propagate it from openconnect.
* gnu/packages/patches/connman-CVE-2021-33833.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2021-06-25 19:02:35 +02:00
Sharlatan Hellseher 8a40a964e0
gnu: Add cl-nst.
Initiate new lisp-check module the same way as other language specific
ones (python-check, haskell-check).

* gnu/local.mk (GNU_SYSTEM_MODULES): Add lisp-check.scm.
* gnu/packages/lisp-check.scm (sbcl-nst, ecl-nst, cl-nst): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-06-24 14:22:09 +02:00
Tobias Geerinckx-Rice a3d9af5eb1
gnu: Remove dead cups-CVE-2020-10001.patch.
* gnu/packages/patches/cups-CVE-2020-10001.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2021-06-23 18:53:11 +02:00
Tobias Geerinckx-Rice 9dea3f101f
Merge branch 'master' into core-updates
Conflicts:
	gnu/packages/cups.scm
	gnu/packages/python-web.scm
	gnu/packages/web.scm
	guix/build/maven/pom.scm
2021-06-23 18:45:21 +02:00
Tobias Geerinckx-Rice 620669fd17
gnu: cups: Add replacement to fix CVE-2020-10001.
* gnu/packages/patches/cups-CVE-2020-10001.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/cups.scm (cups-minimal/fixed): New variable.
(cups-minimal)[replacement]: Assign it to new field.
2021-06-23 18:41:23 +02:00
Jack Hill 30a04c00be
gnu: Add tlf.
* gnu/packages/patches/tlf-support-hamlib-4.2+.patch: New file.
* gnu/local.mk: Add it.
* gnu/packages/radio.scm (tlf): New variable.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-06-21 10:16:04 +02:00
Arun Isaac 0a90bea34d
gnu: linkchecker: Update to 10.0.1.
* gnu/packages/web.scm (linkchecker): Update to 10.0.1.
[source]: Remove patches.
[inputs]: Add python-beautifulsoup4. Replace python2-dnspython-1.16,
python2-pyxdg and python2-requests with python-dnspython, python-pyxdg and
python-requests respectively.
[native-inputs]: Replace python2-pytest, python2-miniboa and
python2-parameterized with python-pytest, python-miniboa and
python-parameterized respectively.
[arguments]: Use python 3. Replace check phase instead of deleting the
standard phase and adding a custom one. Use add-installed-pythonpath instead
of setting PYTHONPATH directly. Support disabling of tests with tests?.
[home-page]: Update URI.
* gnu/packages/patches/linkchecker-tests-require-network.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Unregister it.
2021-06-20 00:24:11 +05:30
Marius Bakke 6f9a80b331
Merge branch 'master' into core-updates
Note: this merge actually changes the 'curl' and 'python-attrs' derivations,
as part of solving caf4a7a277 and
12964df69a respectively.

4604d43c0e (gnu: gnutls@3.6.16: Fix cross-compilation.) was ignored because it
cannot currently be tested.

 Conflicts:
	gnu/local.mk
	gnu/packages/aidc.scm
	gnu/packages/boost.scm
	gnu/packages/curl.scm
	gnu/packages/nettle.scm
	gnu/packages/networking.scm
	gnu/packages/python-xyz.scm
	gnu/packages/tls.scm
2021-06-19 17:38:47 +02:00
Marius Bakke dece03e2b9
gnu: Remove bsdiff traces.
This is a follow-up to 373c7b5791.

* gnu/packages/patches/bsdiff-CVE-2014-9862.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-06-19 17:17:02 +02:00
Marius Bakke 657aaa7be4
gnu: efivar: Adjust for GCC 10.
* gnu/packages/patches/efivar-gcc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/linux.scm (efivar)[source](patches, modules, snippet): New
fields.
[arguments]: Use CC-FOR-TARGET while at it.
2021-06-19 17:09:51 +02:00
Marius Bakke fbee3e134b
gnu: jfsutils: Adjust for GCC 10.
* gnu/packages/patches/jfsutils-gcc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/file-systems.scm (jfsutils)[source](patches): Add it.
2021-06-19 17:09:51 +02:00
Marius Bakke e4d5b509fe
gnu: isc-dhcp: Adjust for GCC 10.
* gnu/packages/patches/isc-dhcp-gcc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/admin.scm (isc-dhcp)[source](patches): New field.
2021-06-19 17:09:51 +02:00
Marius Bakke 5b6d264f12
gnu: ath9k-htc-firmware: Adjust for GCC 10.
* gnu/packages/patches/ath9k-htc-firmware-gcc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/firmware.scm (ath9k-htc-firmware)[source](patches): Add it.
2021-06-19 17:09:51 +02:00
Marius Bakke 2b2ecbace4
gnu: QEMU: Adjust for Sphinx 4.0.
* gnu/packages/patches/qemu-sphinx-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/virtualization.scm (qemu)[source](patches): Add it.
2021-06-19 17:09:51 +02:00
Ludovic Courtès caf4a7a277
gnu: curl@7.77.0: Provide a correct TLS priority string.
Fixes <https://bugs.gnu.org/49035>.

* gnu/packages/patches/curl-7.77-tls-priority-string.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/curl.scm (curl-7.77.0)[source]: Use it.
2021-06-18 17:40:10 +02:00
Boris A. Dekshteyn 624a6b60b5
gnu: inkscape: Update to version 1.1.
* gnu/packages/patches/inkscape-1.1-fix-build-witch-gcc7.5.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/inkscape.scm (inkscape-1.0) Rename to inkscape-1.1.
* gnu/packages/inkscape.scm (inkscape-1.1) Update to version 1.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-06-18 13:12:17 +02:00
Brice Waegeneire db87a223fe
gnu: brightnessctl: Add elogind support.
* gnu/packages/patches/brightnessctl-elogind-support.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/linux.scm (brightnessctl)[source]: Apply it.
[make-flags]: Enable logind support.
[native-inputs]: Add pkg-config.
[inputs]: Add elogind.
2021-06-17 07:27:45 +02:00
Leo Famulari e26efac68c
gnu: HexChat: Add Libera Chat to the list of networks.
* gnu/packages/patches/hexchat-add-libera-chat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/messaging.scm (hexchat)[source]: Use it.
2021-06-16 12:40:17 -04:00
Nicolas Goaziou ae31d80d00
gnu: Add rust-ndarray-0.13.
* gnu/packages/crates-io.scm (rust-ndarray-0.13): New variable.
(rust-ndarray-0.12): Inherit from above.
* gnu/packages/patches/rust-ndarray-0.13-remove-blas-src.patch: New file.
* gnu/local.mk: Register new file.
2021-06-16 12:52:46 +02:00
Tobias Geerinckx-Rice e7aac78ee9
gnu: tor: Update to 0.4.6.5.
* gnu/packages/tor.scm (tor): Update to 0.4.6.5.
[source]: Add a patch to fix building with GCC 7.
* gnu/packages/patches/tor-fix-build-with-gcc-7.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-06-14 23:21:16 +02:00
Carl Dong 83d9e2ee56
gnu: gcc-8: Make static libs reproducible
This fixes the nonreproducibility in gcc documented here:
https://reproducible-builds.org/docs/archives/#gnu-libtool

* gnu/packages/patches/gcc-8-sort-libtool-find-output.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gcc.scm (gcc-8)[source]: Apply it.
2021-06-14 12:29:11 -04:00
Ricardo Wurmus b2f0271c64
gnu: Add irods.
* gnu/packages/irods.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2021-06-14 16:35:06 +02:00
Mark H Weaver 3abaca2aae
gnu: nettle-3.5: Add replacement to fix CVE-2021-3580 et al.
* gnu/packages/patches/nettle-3.5-check-_pkcs1_sec_decrypt-msg-len.patch,
gnu/packages/patches/nettle-3.5-CVE-2021-3580-pt1.patch,
gnu/packages/patches/nettle-3.5-CVE-2021-3580-pt2.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/nettle.scm (nettle)[replacement]: New field.
(nettle-3.5/fixed): New variable.
2021-06-14 03:30:03 -04:00
Leo Famulari ee48e784b9
gnu: connman: Fix CVE-2021-33833.
* gnu/packages/patches/connman-CVE-2021-33833.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/connman.scm (connman)[source]: Use it.
2021-06-13 14:45:19 -04:00
Marius Bakke 628a6c51d4
gnu: QEMU: Fix compatibility with Meson 0.58.
* gnu/packages/patches/qemu-meson-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/virtualization.scm (qemu)[source](patches): Add it.
2021-06-13 15:34:06 +02:00
Marius Bakke 84b238c8f2
gnu: libcacard: Update to 2.8.0.
* gnu/packages/patches/libcacard-unknown-variable.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/spice.scm (libcacard): Update to 2.8.0.
[source](patches): New field.
[arguments]: Remove trailing #t.
2021-06-13 15:34:02 +02:00
Marius Bakke 5d4b721b7d
gnu: graphviz: Update to 2.47.1.
* gnu/packages/graphviz.scm (graphviz): Update to 2.47.1.
[source]: Adjust for new download location.
* gnu/packages/patches/graphviz-CVE-2020-18032.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-06-13 01:00:46 +02:00