04a0594662
gnu: Add r-org-eck12-eg-db.
...
* gnu/packages/bioconductor.scm (r-org-eck12-eg-db): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-12-17 11:26:53 +01:00
e4b0794e52
gnu: Add r-pathview.
...
* gnu/packages/bioconductor.scm (r-pathview): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-12-17 11:26:53 +01:00
7395458d40
gnu: Add r-kegggraph.
...
* gnu/packages/bioconductor.scm (r-kegggraph): New variable.
2020-12-17 11:26:53 +01:00
eb2f1a7dd9
gnu: Add r-gagedata.
...
* gnu/packages/bioconductor.scm (r-gagedata): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-12-17 11:26:53 +01:00
3872153a2f
gnu: r-scuttle: Update to 1.0.3.
...
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.0.3.
[propagated-inputs]: Add r-genomicranges.
2020-12-09 23:30:12 +01:00
eed728951c
gnu: r-beachmat: Update to 2.6.2.
...
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.6.2.
2020-12-09 23:30:12 +01:00
589ac42212
gnu: r-cicero: Update to 1.8.1.
...
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.8.1.
2020-12-09 23:30:12 +01:00
7cda2d415f
gnu: r-biosigner: Update to 1.18.2.
...
* gnu/packages/bioconductor.scm (r-biosigner): Update to 1.18.2.
2020-12-09 23:30:12 +01:00
4714787793
gnu: r-biocneighbors: Update to 1.8.2.
...
* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.8.2.
[propagated-inputs]: Remove r-rcppannoy.
2020-12-09 23:30:12 +01:00
ebf11de4e3
gnu: r-diffbind: Update to 3.0.8.
...
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.0.8.
2020-12-09 12:12:48 +01:00
4617cc7fd5
gnu: r-rhtslib: Propagate zlib.
...
* gnu/packages/bioinformatics.scm (r-rhtslib)[inputs]: Move zlib from here...
[propagated-inputs]: ...to here.
(r-variantannotation, r-rsamtools, r-bamsignals, r-rhdf5,
r-methylkit)[inputs]: Remove zlib.
* gnu/packages/bioconductor.scm (r-diffbind, r-quasr, r-cytolib, r-ncdfflow,
r-flowworkspace, r-seqbias)[inputs]: Remove zlib.
2020-12-09 12:12:48 +01:00
7601015fc9
gnu: r-delayedmatrixstats: Update to 1.12.1.
...
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.12.1.
[propagated-inputs]: Add r-matrixgenerics.
2020-12-09 12:12:48 +01:00
64f9fb308f
gnu: r-bigmelon: Update to 1.16.0.
...
* gnu/packages/bioconductor.scm (r-bigmelon): Update to 1.16.0.
2020-12-09 12:12:48 +01:00
9f6e2bfe1f
gnu: r-watermelon: Update to 1.34.0.
...
* gnu/packages/bioconductor.scm (r-watermelon): Update to 1.34.0.
2020-12-09 12:12:47 +01:00
8db36c1f68
gnu: r-yarn: Update to 1.16.0.
...
* gnu/packages/bioconductor.scm (r-yarn): Update to 1.16.0.
2020-12-09 12:12:47 +01:00
adf6edc750
gnu: r-quantro: Update to 1.24.0.
...
* gnu/packages/bioconductor.scm (r-quantro): Update to 1.24.0.
2020-12-09 12:12:47 +01:00
4eeaa159d2
gnu: r-lumi: Update to 2.42.0.
...
* gnu/packages/bioconductor.scm (r-lumi): Update to 2.42.0.
2020-12-09 12:12:47 +01:00
0b7dd44706
gnu: r-methylumi: Update to 2.36.0.
...
* gnu/packages/bioconductor.scm (r-methylumi): Update to 2.36.0.
2020-12-09 12:12:47 +01:00
e5a4198bc3
gnu: r-minfi: Update to 1.36.0.
...
* gnu/packages/bioconductor.scm (r-minfi): Update to 1.36.0.
2020-12-09 12:12:47 +01:00
45dfb75166
gnu: Add r-catalyst.
...
* gnu/packages/bioconductor.scm (r-catalyst): New variable.
2020-12-09 12:12:47 +01:00
43bf50ecae
gnu: r-ggcyto: Update to 1.18.0.
...
* gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.18.0.
2020-12-09 12:12:47 +01:00
b856a48768
gnu: r-scdd: Update to 1.14.0.
...
* gnu/packages/bioconductor.scm (r-scdd): Update to 1.14.0.
2020-12-09 12:12:47 +01:00
3f04b8167b
gnu: r-chipcomp: Update to 1.20.0.
...
* gnu/packages/bioconductor.scm (r-chipcomp): Update to 1.20.0.
2020-12-09 12:12:47 +01:00
1174317e03
gnu: r-pcatools: Update to 2.2.0.
...
* gnu/packages/bioconductor.scm (r-pcatools): Update to 2.2.0.
2020-12-09 12:12:47 +01:00
b03c955c6f
gnu: r-scran: Update to 1.18.0.
...
* gnu/packages/bioconductor.scm (r-scran): Update to 1.18.0.
[propagated-inputs]: Add r-bluster, r-scuttle. Remove r-iranges.
Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
2020-12-09 12:12:47 +01:00
d4b5d18684
gnu: r-scater: Update to 1.18.3.
...
* gnu/packages/bioconductor.scm (r-scater): Update to 1.18.3.
[propagated-inputs]: Add r-gridextra, r-scutlle. Remove r-beachmat, r-rcpp.
Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
2020-12-09 12:12:46 +01:00
0e60dda0ae
gnu: Add r-scuttle.
...
* gnu/packages/bioconductor.scm (r-scuttle): New variable.
2020-12-09 12:12:46 +01:00
10c87ecf77
gnu: r-delayedmatrixstats: Update to 1.12.0.
...
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.12.0.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>.
2020-12-09 12:12:46 +01:00
4ef898d449
gnu: r-singlecellexperiment: Update to 1.12.0.
...
* gnu/packages/bioconductor.scm (r-singlecellexperiment): Update to 1.12.0.
2020-12-09 12:12:46 +01:00
d0db04fcaf
gnu: r-yapsa: Update to 1.16.0.
...
* gnu/packages/bioconductor.scm (r-yapsa): Update to 1.16.0.
2020-12-09 12:12:46 +01:00
798ec28916
gnu: r-biocsingular: Update to 1.6.0.
...
* gnu/packages/bioconductor.scm (r-biocsingular): Update to 1.6.0.
2020-12-09 12:12:46 +01:00
dd9341ffa3
gnu: r-genomicinteractions: Update to 1.24.0.
...
* gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.24.0.
2020-12-09 12:12:46 +01:00
35dae95110
gnu: r-interactionset: Update to 1.18.0.
...
* gnu/packages/bioconductor.scm (r-interactionset): Update to 1.18.0.
2020-12-09 12:12:46 +01:00
5e719988f2
gnu: Add r-sparsematrixstats.
...
* gnu/packages/bioconductor.scm (r-sparsematrixstats): New variable.
2020-12-09 12:12:46 +01:00
a23310ffc2
gnu: Add r-bluster.
...
* gnu/packages/bioconductor.scm (r-bluster): New variable.
2020-12-09 12:12:45 +01:00
aca4ebe40a
gnu: r-annaffy: Update to 1.62.0.
...
* gnu/packages/bioconductor.scm (r-annaffy): Update to 1.62.0.
2020-12-09 12:12:45 +01:00
16f16b5e21
gnu: Add r-msmstests.
...
* gnu/packages/bioconductor.scm (r-msmstests): New variable.
2020-12-09 12:12:43 +01:00
e520c68fa9
gnu: Add r-msmseda.
...
* gnu/packages/bioconductor.scm (r-msmseq): New variable.
2020-12-09 12:12:43 +01:00
fe4ce29a5c
gnu: r-beachmat: Update to 2.6.1.
...
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.6.1.
2020-12-09 12:12:36 +01:00
0022e9f4c0
gnu: r-ncdfflow: Fix r-rhdf5libs link.
...
* gnu/packages/bioconductor.scm (r-ncdfflow): [arguments]: Avoid to have a
plain directory on the list of libraries to link.
Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
2020-12-09 12:12:36 +01:00
2b224f904a
gnu: r-cytoml: Fix r-rhdf5libs linking.
...
* gnu/packages/bioconductor.scm (r-cytoml): [arguments]: Avoid to have
a plain directory on the list of libraries to link.
2020-12-09 12:12:36 +01:00
ece564f07d
gnu: r-flowworkspace: Fix r-rhdf5libs linking.
...
* gnu/packages/bioconductor.scm (r-flowworkspace): [arguments]: Avoid to have
a plain directory on the list of libraries to link.
2020-12-09 12:12:36 +01:00
26cf5eb568
gnu: r-hdf5array: Fix r-rhdf5libs linking.
...
* gnu/packages/bioconductor.scm (r-hdf5array): [arguments]: Avoid to have a
plain directory on the list of libraries to link.
Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
2020-12-09 12:12:36 +01:00
b58c4e7613
gnu: r-cytolib: Fix r-rhdf5libs linking.
...
* gnu/packages/bioconductor.scm (r-cytolib): [arguments]: Avoid to have a
plain directory on the list of libraries to link.
Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
2020-12-09 12:12:36 +01:00
c5ae5c1c40
gnu: r-rhdf5lib: Fix build.
...
* gnu/packages/bioconductor.scm (r-rhdf5lib)[arguments]: Fix build.
2020-12-09 12:12:36 +01:00
79cb6af375
gnu: r-rhdf5lib: Update to 1.12.0.
...
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.12.0.
2020-12-09 12:12:36 +01:00
5992c25e7f
gnu: r-hdf5array: Update to 1.18.0.
...
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.18.0.
2020-12-09 12:12:36 +01:00
c8da013780
gnu: Add r-matrixgenerics.
...
* gnu/packages/bioconductor.scm (r-matrixgenerics): New variable.
2020-12-09 12:12:36 +01:00
ed44a72acf
gnu: r-hitc: Update to 1.34.0.
...
* gnu/packages/bioconductor.scm (r-hitc): Update to 1.34.0.
2020-12-09 12:12:35 +01:00
7105658e9c
gnu: r-fithic: Update to 1.16.0.
...
* gnu/packages/bioconductor.scm (r-fithic): Update to 1.16.0.
2020-12-09 12:12:35 +01:00
b6348b0edf
gnu: r-rgraphviz: Update to 2.34.0.
...
* gnu/packages/bioconductor.scm (r-rgraphviz): Update to 2.34.0.
2020-12-09 12:12:35 +01:00
8fa30df02a
gnu: r-preprocesscore: Update to 1.52.0.
...
* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.52.0.
2020-12-09 12:12:35 +01:00
e5b2c80dc2
gnu: r-fourcseq: Update to 1.24.0.
...
* gnu/packages/bioconductor.scm (r-fourcseq): Update to 1.24.0.
2020-12-09 12:12:35 +01:00
3cacc3bdce
gnu: r-icens: Update to 1.62.0.
...
* gnu/packages/bioconductor.scm (r-icens): Update to 1.62.0.
2020-12-09 12:12:35 +01:00
126846a0da
gnu: r-m3c: Update to 1.12.0.
...
* gnu/packages/bioconductor.scm (r-m3c): Update to 1.12.0.
2020-12-09 12:12:35 +01:00
7a242042ae
gnu: r-rgreat: Update to 1.22.0.
...
* gnu/packages/bioconductor.scm (r-rgreat): Update to 1.22.0.
2020-12-09 12:12:35 +01:00
15be98c136
gnu: r-biodist: Update to 1.62.0.
...
* gnu/packages/bioconductor.scm (r-biodist): Update to 1.62.0.
2020-12-09 12:12:34 +01:00
7891c83c3e
gnu: r-biocworkflowtools: Update to 1.16.0.
...
* gnu/packages/bioconductor.scm (r-biocworkflowtools): Update to 1.16.0.
2020-12-09 12:12:34 +01:00
feb0cbf402
gnu: r-biocset: Update to 1.4.0.
...
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.4.0.
[propagated-inputs]: Add r-s4vectors; remove r-rtracklayer.
2020-12-09 12:12:34 +01:00
ff4834c065
gnu: Add r-biocio.
...
* gnu/packages/bioconductor.scm (r-biocio): New variable.
2020-12-09 12:12:34 +01:00
6a5d8cadee
gnu: r-biocpkgtools: Update to 1.8.0.
...
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.8.0.
2020-12-09 12:12:34 +01:00
072f722f8e
gnu: r-biocor: Update to 1.14.0.
...
* gnu/packages/bioconductor.scm (r-biocor): Update to 1.14.0.
2020-12-09 12:12:34 +01:00
e29b15ee97
gnu: r-bioconcotk: Update to 1.10.0.
...
* gnu/packages/bioconductor.scm (r-bioconcotk): Update to 1.10.0.
2020-12-09 12:12:34 +01:00
13d0b780c1
gnu: r-multiassayexperiment: Update to 1.16.0.
...
* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.16.0.
2020-12-09 12:12:34 +01:00
49a728581f
gnu: r-experimenthub: Update to 1.16.0.
...
* gnu/packages/bioconductor.scm (r-experimenthub): Update to 1.16.0.
2020-12-09 12:12:34 +01:00
abc18fc596
gnu: r-biocgraph: Update to 1.52.0.
...
* gnu/packages/bioconductor.scm (r-biocgraph): Update to 1.52.0.
2020-12-09 12:12:34 +01:00
7dced9ad01
gnu: r-bioccasestudies: Update to 1.52.0.
...
* gnu/packages/bioconductor.scm (r-bioccasestudies): Update to 1.52.0.
2020-12-09 12:12:34 +01:00
b0f3bfe4ae
gnu: r-ebarrays: Update to 2.54.0.
...
* gnu/packages/bioconductor.scm (r-ebarrays): Update to 2.54.0.
2020-12-09 12:12:34 +01:00
a4f4a55283
gnu: r-reactomepa: Update to 1.34.0.
...
* gnu/packages/bioconductor.scm (r-reactomepa): Update to 1.34.0.
2020-12-09 12:12:34 +01:00
26224e09ae
gnu: r-graphite: Update to 1.36.0.
...
* gnu/packages/bioconductor.scm (r-graphite): Update to 1.36.0.
2020-12-09 12:12:34 +01:00
95e30d8f6e
gnu: r-biobroom: Update to 1.22.0.
...
* gnu/packages/bioconductor.scm (r-biobroom): Update to 1.22.0.
2020-12-09 12:12:33 +01:00
2f36b0406e
gnu: r-bioassayr: Update to 1.28.0.
...
* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.28.0.
2020-12-09 12:12:33 +01:00
95ef268142
gnu: r-chemminer: Update to 3.42.0.
...
* gnu/packages/bioconductor.scm (r-chemminer): Update to 3.42.0.
2020-12-09 12:12:33 +01:00
1e28867803
gnu: r-bigpint: Update to 1.6.0.
...
* gnu/packages/bioconductor.scm (r-bigpint): Update to 1.6.0.
2020-12-09 12:12:33 +01:00
e80f8262f6
gnu: r-bigmemoryextras: Update to 1.38.0.
...
* gnu/packages/bioconductor.scm (r-bigmemoryextras): Update to 1.38.0.
2020-12-09 12:12:33 +01:00
0f94a9edb0
gnu: r-biggr: Update to 1.26.0.
...
* gnu/packages/bioconductor.scm (r-biggr): Update to 1.26.0.
2020-12-09 12:12:33 +01:00
249b703056
gnu: r-hyperdraw: Update to 1.42.0.
...
* gnu/packages/bioconductor.scm (r-hyperdraw): Update to 1.42.0.
2020-12-09 12:12:33 +01:00
294fd58a42
gnu: r-hypergraph: Update to 1.62.0.
...
* gnu/packages/bioconductor.scm (r-hypergraph): Update to 1.62.0.
2020-12-09 12:12:33 +01:00
3320f044a3
gnu: r-rsbml: Update to 2.48.0.
...
* gnu/packages/bioconductor.scm (r-rsbml): Update to 2.48.0.
2020-12-09 12:12:33 +01:00
d57be63323
gnu: r-bifet: Update to 1.10.0.
...
* gnu/packages/bioconductor.scm (r-bifet): Update to 1.10.0.
2020-12-09 12:12:33 +01:00
4ec665693d
gnu: r-bicare: Update to 1.48.0.
...
* gnu/packages/bioconductor.scm (r-bicare): Update to 1.48.0.
2020-12-09 12:12:33 +01:00
2219bef12f
gnu: r-bhc: Update to 1.42.0.
...
* gnu/packages/bioconductor.scm (r-bhc): Update to 1.42.0.
2020-12-09 12:12:33 +01:00
3cebe2745a
gnu: r-bgx: Update to 1.56.0.
...
* gnu/packages/bioconductor.scm (r-bgx): Update to 1.56.0.
2020-12-09 12:12:33 +01:00
fad5da32dc
gnu: r-bgmix: Update to 1.50.0.
...
* gnu/packages/bioconductor.scm (r-bgmix): Update to 1.50.0.
2020-12-09 12:12:32 +01:00
fa7e242910
gnu: r-unifiedwmwqpcr: Update to 1.26.0.
...
* gnu/packages/bioconductor.scm (r-unifiedwmwqpcr): Update to 1.26.0.
2020-12-09 12:12:32 +01:00
949626f209
gnu: r-htqpcr: Update to 1.44.0.
...
* gnu/packages/bioconductor.scm (r-htqpcr): Update to 1.44.0.
2020-12-09 12:12:32 +01:00
44ecd5f77f
gnu: r-variancepartition: Update to 1.20.0.
...
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.20.0.
2020-12-09 12:12:32 +01:00
45ea773f94
gnu: r-variantfiltering: Update to 1.26.0.
...
* gnu/packages/bioconductor.scm (r-variantfiltering): Update to 1.26.0.
2020-12-09 12:12:32 +01:00
87f704b43c
gnu: r-timeseriesexperiment: Update to 1.8.0.
...
* gnu/packages/bioconductor.scm (r-timeseriesexperiment): Update to 1.8.0.
2020-12-09 12:12:32 +01:00
fd7e23b551
gnu: r-wavcluster: Update to 2.24.0.
...
* gnu/packages/bioconductor.scm (r-wavcluster): Update to 2.24.0.
2020-12-09 12:12:32 +01:00
0c53f27dd6
gnu: r-reqon: Update to 1.36.0.
...
* gnu/packages/bioconductor.scm (r-reqon): Update to 1.36.0.
2020-12-09 12:12:32 +01:00
42e00c0923
gnu: r-seqbias: Update to 1.38.0.
...
* gnu/packages/bioconductor.scm (r-seqbias): Update to 1.38.0.
2020-12-09 12:12:32 +01:00
a50779b8a3
gnu: r-gdsfmt: Update to 1.26.0.
...
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.26.0.
2020-12-09 12:12:32 +01:00
e7b61ba7f6
gnu: r-roc: Update to 1.66.0.
...
* gnu/packages/bioconductor.scm (r-roc): Update to 1.66.0.
2020-12-09 12:12:31 +01:00
5d1bd61137
gnu: r-genie3: Update to 1.12.0.
...
* gnu/packages/bioconductor.scm (r-genie3): Update to 1.12.0.
2020-12-09 12:12:31 +01:00
7954fe16a0
gnu: r-cicero: Update to 1.8.0.
...
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.8.0.
2020-12-09 12:12:31 +01:00
6481357330
gnu: r-rcistarget: Update to 1.10.0.
...
* gnu/packages/bioconductor.scm (r-rcistarget): Update to 1.10.0.
2020-12-09 12:12:31 +01:00
fafaeab48b
gnu: r-depecher: Update to 1.6.0.
...
* gnu/packages/bioconductor.scm (r-depecher): Update to 1.6.0.
2020-12-09 12:12:31 +01:00
0e78ce36f0
gnu: r-mixomics: Update to 6.14.0.
...
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.14.0.
2020-12-09 12:12:31 +01:00
1f7ddaf0fb
gnu: r-flowsom: Update to 1.22.0.
...
* gnu/packages/bioconductor.scm (r-flowsom): Update to 1.22.0.
2020-12-09 12:12:31 +01:00
63033b159a
gnu: r-cytoml: Update to 2.2.1.
...
* gnu/packages/bioconductor.scm (r-cytoml): Update to 2.2.1.
2020-12-09 12:12:31 +01:00
5abf0a0dd2
gnu: r-opencyto: Update to 2.2.0.
...
* gnu/packages/bioconductor.scm (r-opencyto): Update to 2.2.0.
2020-12-09 12:12:30 +01:00
fd11c7b80f
gnu: r-flowstats: Update to 4.2.0.
...
* gnu/packages/bioconductor.scm (r-flowstats): Update to 4.2.0.
2020-12-09 12:12:30 +01:00
1b347814f8
gnu: r-flowworkspace: Update to 4.2.0.
...
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.2.0.
[inputs]: Add zlib.
[propagated-inputs]: Add r-aws-s3 and r-aws-signature. Remove r-stringr.
2020-12-09 12:12:30 +01:00
5bab0b7eee
gnu: r-rprotobuflib: Update to 2.2.0.
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* gnu/packages/bioconductor.scm (r-rprotobuflib): Update to 2.2.0.
2020-12-09 12:12:30 +01:00
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gnu: r-flowclust: Update to 3.28.0.
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* gnu/packages/bioconductor.scm (r-flowclust): Update to 3.28.0.
2020-12-09 12:12:30 +01:00
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gnu: r-flowviz: Update to 1.54.0.
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* gnu/packages/bioconductor.scm (r-flowviz): Update to 1.54.0.
2020-12-09 12:12:30 +01:00
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gnu: r-ncdfflow: Update to 2.36.0.
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* gnu/packages/bioconductor.scm (r-ncdfflow): Update to 2.36.0.
2020-12-09 12:12:30 +01:00
2cd78131cc
gnu: r-flowmeans: Update to 1.50.0.
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* gnu/packages/bioconductor.scm (r-flowmeans): Update to 1.50.0.
2020-12-09 12:12:30 +01:00
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gnu: r-flowcore: Update to 2.2.0.
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* gnu/packages/bioconductor.scm (r-flowcore): Update to 2.2.0.
[propagated-inputs]: Add r-s4vectors.
2020-12-09 12:12:29 +01:00
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gnu: r-cytolib: Update to 2.2.0.
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* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.2.0.
[native-inputs]: Add pkg-config.
2020-12-09 12:12:29 +01:00
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gnu: r-consensusclusterplus: Update to 1.54.0.
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* gnu/packages/bioconductor.scm (r-consensusclusterplus): Update to 1.54.0.
2020-12-09 12:12:29 +01:00
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gnu: r-flowutils: Update to 1.54.0.
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* gnu/packages/bioconductor.scm (r-flowutils): Update to 1.54.0.
2020-12-09 12:12:29 +01:00
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gnu: r-rsubread: Update to 2.4.2.
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* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.4.2.
2020-12-09 12:12:29 +01:00
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gnu: r-annotatr: Update to 1.16.0.
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* gnu/packages/bioconductor.scm (r-annotatr): Update to 1.16.0.
2020-12-09 12:12:29 +01:00
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gnu: r-biosigner: Update to 1.18.0.
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* gnu/packages/bioconductor.scm (r-biosigner): Update to 1.18.0.
2020-12-09 12:12:29 +01:00
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gnu: r-ropls: Update to 1.22.0.
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* gnu/packages/bioconductor.scm (r-ropls): Update to 1.22.0.
2020-12-09 12:12:29 +01:00
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gnu: r-multidataset: Update to 1.18.0.
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* gnu/packages/bioconductor.scm (r-multidataset): Update to 1.18.0.
2020-12-09 12:12:29 +01:00
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gnu: r-birewire: Update to 3.22.0.
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* gnu/packages/bioconductor.scm (r-birewire): Update to 3.22.0.
2020-12-09 12:12:29 +01:00
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gnu: r-rqc: Update to 1.24.0.
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* gnu/packages/bioconductor.scm (r-rqc): Update to 1.24.0.
2020-12-09 12:12:29 +01:00
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gnu: r-quasr: Update to 1.30.0.
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* gnu/packages/bioconductor.scm (r-quasr): Update to 1.30.0.
2020-12-09 12:12:29 +01:00
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gnu: r-rhisat2: Update to 1.6.0.
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* gnu/packages/bioconductor.scm (r-rhisat2): Update to 1.6.0.
2020-12-09 12:12:28 +01:00
ca0271c550
gnu: r-sgseq: Update to 1.24.0.
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* gnu/packages/bioconductor.scm (r-sgseq): Update to 1.24.0.
2020-12-09 12:12:28 +01:00
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gnu: r-rbowtie: Update to 1.30.0.
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* gnu/packages/bioconductor.scm (r-rbowtie): Update to 1.30.0.
2020-12-09 12:12:28 +01:00
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gnu: r-iclusterplus: Update to 1.26.0.
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* gnu/packages/bioconductor.scm (r-iclusterplus): Update to 1.26.0.
2020-12-09 12:12:28 +01:00
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* gnu/packages/bioconductor.scm (r-biocfilecache): Update to 1.14.0.
2020-12-09 12:12:28 +01:00
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gnu: r-arrmnormalization: Update to 1.30.0.
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* gnu/packages/bioconductor.scm (r-arrmnormalization): Update to 1.30.0.
2020-12-09 12:12:28 +01:00
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gnu: r-progeny: Update to 1.12.0.
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* gnu/packages/bioconductor.scm (r-progeny): Update to 1.12.0.
2020-12-09 12:12:28 +01:00
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gnu: r-rbowtie2: Update to 1.12.0.
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* gnu/packages/bioconductor.scm (r-rbowtie2): Update to 1.12.0.
2020-12-09 12:12:28 +01:00
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gnu: r-zfpkm: Update to 1.12.0.
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* gnu/packages/bioconductor.scm (r-zfpkm): Update to 1.12.0.
2020-12-09 12:12:28 +01:00
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gnu: r-webbioc: Update to 1.62.0.
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* gnu/packages/bioconductor.scm (r-webbioc): Update to 1.62.0.
2020-12-09 12:12:28 +01:00
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gnu: r-widgettools: Update to 1.68.0.
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* gnu/packages/bioconductor.scm (r-widgettools): Update to 1.68.0.
2020-12-09 12:12:28 +01:00
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gnu: r-wiggleplotr: Update to 1.14.0.
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* gnu/packages/bioconductor.scm (r-wiggleplotr): Update to 1.14.0.
2020-12-09 12:12:28 +01:00
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gnu: r-wrench: Update to 1.8.0.
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* gnu/packages/bioconductor.scm (r-wrench): Update to 1.8.0.
2020-12-09 12:12:28 +01:00
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gnu: r-xcms: Update to 3.12.0.
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* gnu/packages/bioconductor.scm (r-xcms): Update to 3.12.0.
[propagated-inputs]: Add r-mscoreutils.
2020-12-09 12:12:27 +01:00
fa2201c108
gnu: Add r-mscoreutils.
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* gnu/packages/bioconductor.scm (r-mscoreutils): New variable.
2020-12-09 12:12:27 +01:00
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gnu: r-massspecwavelet: Update to 1.56.0.
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* gnu/packages/bioconductor.scm (r-massspecwavelet): Update to 1.56.0.
2020-12-09 12:12:27 +01:00
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gnu: r-xbseq: Update to 1.22.0.
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* gnu/packages/bioconductor.scm (r-xbseq): Update to 1.22.0.
2020-12-09 12:12:27 +01:00
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gnu: r-roar: Update to 1.26.0.
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* gnu/packages/bioconductor.scm (r-roar): Update to 1.26.0.
2020-12-09 12:12:27 +01:00
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gnu: r-yaqcaffy: Update to 1.50.0.
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* gnu/packages/bioconductor.scm (r-yaqcaffy): Update to 1.50.0.
2020-12-09 12:12:27 +01:00
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gnu: r-simpleaffy: Update to 2.66.0.
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* gnu/packages/bioconductor.scm (r-simpleaffy): Update to 2.66.0.
2020-12-09 12:12:27 +01:00
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* gnu/packages/bioconductor.scm (r-gcrma): Update to 2.62.0.
2020-12-09 12:12:27 +01:00
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gnu: r-somaticsignatures: Update to 2.26.0.
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* gnu/packages/bioconductor.scm (r-somaticsignatures): Update to 2.26.0.
2020-12-09 12:12:27 +01:00
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gnu: r-gtrellis: Update to 1.22.0.
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* gnu/packages/bioconductor.scm (r-gtrellis): Update to 1.22.0.
2020-12-09 12:12:27 +01:00
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* gnu/packages/bioconductor.scm (r-yamss): Update to 1.16.0.
2020-12-09 12:12:27 +01:00
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gnu: r-ebimage: Update to 4.32.0.
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* gnu/packages/bioconductor.scm (r-ebimage): Update to 4.32.0.
2020-12-09 12:12:27 +01:00
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gnu: r-aucell: Update to 1.12.0.
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* gnu/packages/bioconductor.scm (r-aucell): Update to 1.12.0.
2020-12-09 12:12:26 +01:00
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gnu: r-allelicimbalance: Update to 1.28.0.
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* gnu/packages/bioconductor.scm (r-allelicimbalance): Update to 1.28.0.
2020-12-09 12:12:26 +01:00
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gnu: r-annotationtools: Update to 1.64.0.
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* gnu/packages/bioconductor.scm (r-annotationtools): Update to 1.64.0.
2020-12-09 12:12:26 +01:00
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gnu: r-annotationfuncs: Update to 1.40.0.
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* gnu/packages/bioconductor.scm (r-annotationfuncs): Update to 1.40.0.
2020-12-09 12:12:26 +01:00
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gnu: r-abaenrichment: Update to 1.20.0.
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* gnu/packages/bioconductor.scm (r-abaenrichment): Update to 1.20.0.
2020-12-09 12:12:26 +01:00
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* gnu/packages/bioconductor.scm (r-gofuncr): Update to 1.10.0.
2020-12-09 12:12:26 +01:00
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gnu: r-atacseqqc: Update to 1.14.4.
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* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.14.4.
2020-12-09 12:12:26 +01:00
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gnu: r-genomicscores: Update to 2.2.0.
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* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.2.0.
2020-12-09 12:12:26 +01:00
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gnu: r-motifstack: Update to 1.34.0.
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* gnu/packages/bioconductor.scm (r-motifstack): Update to 1.34.0.
2020-12-09 12:12:26 +01:00
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* gnu/packages/bioconductor.scm (r-motifbreakr): Update to 2.4.0.
2020-12-09 12:12:26 +01:00
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gnu: r-motifdb: Update to 1.32.0.
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* gnu/packages/bioconductor.scm (r-motifdb): Update to 1.32.0.
2020-12-09 12:12:26 +01:00
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gnu: r-rgadem: Update to 2.38.0.
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* gnu/packages/bioconductor.scm (r-rgadem): Update to 2.38.0.
2020-12-09 12:12:26 +01:00
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gnu: r-bacon: Update to 1.18.0.
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* gnu/packages/bioconductor.scm (r-bacon): Update to 1.18.0.
2020-12-09 12:12:26 +01:00
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* gnu/packages/bioconductor.scm (r-abseqr): Update to 1.8.0.
2020-12-09 12:12:26 +01:00
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gnu: r-a4: Update to 1.38.0.
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* gnu/packages/bioconductor.scm (r-a4): Update to 1.38.0.
2020-12-09 12:12:25 +01:00
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* gnu/packages/bioconductor.scm (r-a4base): Update to 1.38.0.
2020-12-09 12:12:25 +01:00
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* gnu/packages/bioconductor.scm (r-a4reporting): Update to 1.38.0.
2020-12-09 12:12:25 +01:00
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* gnu/packages/bioconductor.scm (r-a4preproc): Update to 1.38.0.
2020-12-09 12:12:25 +01:00
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gnu: r-a4classif: Update to 1.38.0.
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* gnu/packages/bioconductor.scm (r-a4classif): Update to 1.38.0.
2020-12-09 12:12:25 +01:00
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gnu: r-a4core: Update to 1.38.0.
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* gnu/packages/bioconductor.scm (r-a4core): Update to 1.38.0.
2020-12-09 12:12:25 +01:00
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gnu: r-mlinterfaces: Update to 1.70.0.
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* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.70.0.
2020-12-09 12:12:25 +01:00
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gnu: r-clusterprofiler: Update to 3.18.0.
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* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.18.0.
2020-12-09 12:12:25 +01:00
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gnu: r-enrichplot: Update to 1.10.1.
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* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.10.1.
[propagated-inputs]: Remove r-annotationdbi, r-europepmc, r-ggplotify,
r-ggridges, and r-gridextra; add r-magrittr and r-shadowtext.
2020-12-09 12:12:25 +01:00
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gnu: r-dose: Update to 3.16.0.
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* gnu/packages/bioconductor.scm (r-dose): Update to 3.16.0.
2020-12-09 12:12:25 +01:00
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* gnu/packages/bioconductor.scm (r-fgsea): Update to 1.16.0.
2020-12-09 12:12:25 +01:00
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gnu: r-sigpathway: Update to 1.58.0.
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* gnu/packages/bioconductor.scm (r-sigpathway): Update to 1.58.0.
2020-12-09 12:12:25 +01:00
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gnu: r-anota: Update to 1.38.0.
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* gnu/packages/bioconductor.scm (r-anota): Update to 1.38.0.
2020-12-09 12:12:24 +01:00
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gnu: r-gosemsim: Update to 2.16.1.
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* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.16.1.
2020-12-09 12:12:24 +01:00
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gnu: r-heatplus: Update to 2.36.0.
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* gnu/packages/bioconductor.scm (r-heatplus): Update to 2.36.0.
2020-12-09 12:12:24 +01:00
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gnu: r-varianttools: Update to 1.32.0.
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* gnu/packages/bioconductor.scm (r-varianttools): Update to 1.32.0.
2020-12-09 12:12:24 +01:00
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gnu: r-ioniser: Update to 2.14.0.
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* gnu/packages/bioconductor.scm (r-ioniser): Update to 2.14.0.
2020-12-09 12:12:24 +01:00
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* gnu/packages/bioconductor.scm (r-linnorm): Update to 2.14.0.
2020-12-09 12:12:24 +01:00
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* gnu/packages/bioconductor.scm (r-bumphunter): Update to 1.32.0.
2020-12-09 12:12:24 +01:00
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gnu: r-siggenes: Update to 1.64.0.
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* gnu/packages/bioconductor.scm (r-siggenes): Update to 1.64.0.
2020-12-09 12:12:24 +01:00
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gnu: r-illuminaio: Update to 0.32.0.
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* gnu/packages/bioconductor.scm (r-illuminaio): Update to 0.32.0.
2020-12-09 12:12:24 +01:00
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gnu: r-geoquery: Update to 2.58.0.
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* gnu/packages/bioconductor.scm (r-geoquery): Update to 2.58.0.
2020-12-09 12:12:24 +01:00
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* gnu/packages/bioconductor.scm (r-scone): Update to 1.14.0.
2020-12-09 12:12:24 +01:00
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gnu: r-noiseq: Update to 2.34.0.
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* gnu/packages/bioconductor.scm (r-noiseq): Update to 2.34.0.
2020-12-09 12:12:24 +01:00
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* gnu/packages/bioconductor.scm (r-monocle): Update to 2.18.0.
2020-12-09 12:12:24 +01:00
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* gnu/packages/bioconductor.scm (r-mast): Update to 1.16.0.
2020-12-09 12:12:24 +01:00
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* gnu/packages/bioconductor.scm (r-icobra): Update to 1.18.0.
2020-12-09 12:12:23 +01:00
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gnu: r-ihw: Update to 1.18.0.
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* gnu/packages/bioconductor.scm (r-ihw): Update to 1.18.0.
2020-12-09 12:12:23 +01:00
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* gnu/packages/bioconductor.scm (r-lpsymphony): Update to 1.18.0.
2020-12-09 12:12:23 +01:00
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* gnu/packages/bioconductor.scm (r-karyoploter): Update to 1.16.0.
2020-12-09 12:12:23 +01:00
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gnu: r-ebseq: Update to 1.30.0.
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* gnu/packages/bioconductor.scm (r-ebseq): Update to 1.30.0.
2020-12-09 12:12:23 +01:00
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* gnu/packages/bioconductor.scm (r-dnacopy): Update to 1.64.0.
2020-12-09 12:12:23 +01:00
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gnu: r-copynumber: Update to 1.30.0.
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* gnu/packages/bioconductor.scm (r-copynumber): Update to 1.30.0.
2020-12-09 12:12:23 +01:00
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gnu: r-chipexoqual: Update to 1.14.0.
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* gnu/packages/bioconductor.scm (r-chipexoqual): Update to 1.14.0.
2020-12-09 12:12:23 +01:00
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gnu: r-savr: Update to 1.28.0.
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* gnu/packages/bioconductor.scm (r-savr): Update to 1.28.0.
2020-12-09 12:12:23 +01:00
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gnu: r-destiny: Update to 3.4.0.
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* gnu/packages/bioconductor.scm (r-destiny): Update to 3.4.0.
[propagated-inputs]: Remove r-nbconvertr.
2020-12-09 12:12:23 +01:00
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gnu: r-biocneighbors: Update to 1.8.0.
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* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.8.0.
2020-12-09 12:12:23 +01:00
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* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.24.0.
2020-12-09 12:12:23 +01:00
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gnu: r-dnabarcodes: Update to 1.20.0.
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* gnu/packages/bioconductor.scm (r-dnabarcodes): Update to 1.20.0.
2020-12-09 12:12:22 +01:00
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gnu: r-inspect: Update to 1.20.0.
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* gnu/packages/bioconductor.scm (r-inspect): Update to 1.20.0.
2020-12-09 12:12:22 +01:00
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gnu: r-plgem: Update to 1.62.0.
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* gnu/packages/bioconductor.scm (r-plgem): Update to 1.62.0.
2020-12-09 12:12:22 +01:00
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gnu: r-rots: Update to 1.18.0.
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* gnu/packages/bioconductor.scm (r-rots): Update to 1.18.0.
2020-12-09 12:12:22 +01:00
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gnu: r-glimma: Update to 2.0.0.
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* gnu/packages/bioconductor.scm (r-glimma): Update to 2.0.0.
2020-12-09 12:12:22 +01:00
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gnu: r-goseq: Update to 1.42.0.
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* gnu/packages/bioconductor.scm (r-goseq): Update to 1.42.0.
2020-12-09 12:12:22 +01:00
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gnu: r-ctc: Update to 1.64.0.
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* gnu/packages/bioconductor.scm (r-ctc): Update to 1.64.0.
2020-12-09 12:12:22 +01:00
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gnu: r-riboseqr: Update to 1.24.0.
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* gnu/packages/bioconductor.scm (r-riboseqr): Update to 1.24.0.
2020-12-09 12:12:22 +01:00
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* gnu/packages/bioconductor.scm (r-riboprofiling): Update to 1.20.0.
2020-12-09 12:12:22 +01:00
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gnu: r-bayseq: Update to 2.24.0.
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* gnu/packages/bioconductor.scm (r-bayseq): Update to 2.24.0.
2020-12-09 12:12:22 +01:00
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gnu: r-qdnaseq: Update to 1.26.0.
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* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.26.0.
2020-12-09 12:12:22 +01:00
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gnu: r-cghcall: Update to 2.52.0.
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* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.52.0.
2020-12-09 12:12:22 +01:00
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gnu: r-cghbase: Update to 1.50.0.
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* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.50.0.
2020-12-09 12:12:22 +01:00
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gnu: r-marray: Update to 1.68.0.
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2020-12-09 12:12:22 +01:00
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gnu: r-chippeakanno: Update to 3.24.0.
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* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.24.0.
2020-12-09 12:12:21 +01:00
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gnu: r-graph: Update to 1.68.0.
...
* gnu/packages/bioconductor.scm (r-graph): Update to 1.68.0.
2020-12-09 12:12:21 +01:00
1e6920c521
gnu: r-multtest: Update to 2.46.0.
...
* gnu/packages/bioconductor.scm (r-multtest): Update to 2.46.0.
2020-12-09 12:12:21 +01:00
341ebaaa01
gnu: r-diffbind: Update to 3.0.7.
...
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.0.7.
[propagated-inputs]: Add r-apeglm, r-ashr, and r-greylistchip; remove r-edger.
2020-12-09 12:12:21 +01:00
6e396c4bff
gnu: Add r-greylistchip.
...
* gnu/packages/bioconductor.scm (r-greylistchip): New variable.
2020-12-09 12:12:21 +01:00
3b399e514f
gnu: Add r-apeglm.
...
* gnu/packages/bioconductor.scm (r-apeglm): New variable.
2020-12-09 12:12:21 +01:00
a0df9b93ef
gnu: Add r-rcppnumerical.
...
* gnu/packages/bioconductor.scm (r-rcppnumerical): New variable.
2020-12-09 12:12:21 +01:00
e9b60a2901
gnu: r-qvalue: Update to 2.22.0.
...
* gnu/packages/bioconductor.scm (r-qvalue): Update to 2.22.0.
2020-12-09 12:12:21 +01:00
9af6fdf861
gnu: r-oligo: Update to 1.54.0.
...
* gnu/packages/bioconductor.scm (r-oligo): Update to 1.54.0.
2020-12-09 12:12:21 +01:00
464df5ccbb
gnu: r-oligoclasses: Update to 1.52.0.
...
* gnu/packages/bioconductor.scm (r-oligoclasses): Update to 1.52.0.
2020-12-09 12:12:21 +01:00
d72c4c98c8
gnu: r-geneplotter: Update to 1.68.0.
...
* gnu/packages/bioconductor.scm (r-geneplotter): Update to 1.68.0.
2020-12-09 12:12:20 +01:00
c03c76344e
gnu: r-reportingtools: Update to 2.30.0.
...
* gnu/packages/bioconductor.scm (r-reportingtools): Update to 2.30.0.
2020-12-09 12:12:20 +01:00
d1ff3604b7
gnu: r-regioner: Update to 1.22.0.
...
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.22.0.
2020-12-09 12:12:20 +01:00
fa7578b32f
gnu: r-hpar: Update to 1.32.1.
...
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.32.1.
2020-12-09 12:12:20 +01:00
7d56302332
gnu: r-annotate: Update to 1.68.0.
...
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.68.0.
[propagated-inputs]: Remove 'r-rcurl', add 'r-httr'.
2020-12-09 12:12:20 +01:00
8e6a2c328f
gnu: r-affxparser: Update to 1.62.0.
...
* gnu/packages/bioconductor.scm (r-affxparser): Update to 1.62.0.
2020-12-09 12:12:20 +01:00
a92219b45f
gnu: r-affycoretools: Update to 1.62.0.
...
* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.62.0.
2020-12-09 12:12:20 +01:00
3e82f9ccaf
gnu: r-affycontam: Update to 1.48.0.
...
* gnu/packages/bioconductor.scm (r-affycontam): Update to 1.48.0.
2020-12-09 12:12:20 +01:00
fa2d16cc27
gnu: r-affycompatible: Update to 1.50.0.
...
* gnu/packages/bioconductor.scm (r-affycompatible): Update to 1.50.0.
2020-12-09 12:12:20 +01:00
c472549f67
gnu: r-affycomp: Update to 1.66.0.
...
* gnu/packages/bioconductor.scm (r-affycomp): Update to 1.66.0.
2020-12-09 12:12:20 +01:00
aa311eaa74
gnu: r-biocgenerics: Update to 0.36.0.
...
* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.36.0.
2020-12-09 12:12:20 +01:00
70ab99096d
gnu: r-biocversion: Update to 3.12.0.
...
* gnu/packages/bioconductor.scm (r-biocversion): Update to 3.12.0.
2020-12-09 12:12:20 +01:00
a3e2e53837
gnu: r-cummerbund: Update to 2.32.0.
...
* gnu/packages/bioconductor.scm (r-cummerbund): Update to 2.32.0.
2020-12-09 12:12:20 +01:00
5ef637ddc7
gnu: r-coverageview: Update to 1.28.0.
...
* gnu/packages/bioconductor.scm (r-coverageview): Update to 1.28.0.
2020-12-09 12:12:20 +01:00
25f4e6520e
gnu: r-ideoviz: Update to 1.26.0.
...
* gnu/packages/bioconductor.scm (r-ideoviz): Update to 1.26.0.
2020-12-09 12:12:20 +01:00
a07717cc8b
gnu: Add r-perfmeas.
...
* gnu/packages/bioconductor.scm (r-perfmeas): New variable.
2020-10-30 21:49:33 +01:00
7337615d1c
gnu: r-bgx: Update to 1.54.1.
...
* gnu/packages/bioconductor.scm (r-bgx): Update to 1.54.1.
2020-10-06 13:23:38 +02:00
40b86e20eb
gnu: r-xcms: Update to 3.10.2.
...
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.10.2.
2020-10-06 13:23:38 +02:00
56bca8965a
gnu: r-atacseqqc: Update to 1.12.5.
...
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.12.5.
2020-10-06 13:23:37 +02:00
f000fab88f
gnu: r-gosemsim: Update to 2.14.2.
...
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.14.2.
2020-10-06 13:23:37 +02:00
d7314e4747
gnu: r-karyoploter: Update to 1.14.1.
...
* gnu/packages/bioconductor.scm (r-karyoploter): Update to 1.14.1.
2020-10-06 13:23:37 +02:00
dce2d06fcc
gnu: r-diffbind: Update to 2.16.2.
...
* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.16.2.
2020-10-06 13:23:34 +02:00
d7cfdc1229
gnu: r-fhtest: Update to 1.5.
...
* gnu/packages/bioconductor.scm (r-fhtest): Update to 1.5.
2020-10-06 00:34:56 +02:00
65e361f98f
gnu: r-interval: Update to 1.1-0.7.
...
* gnu/packages/bioconductor.scm (r-interval): Update to 1.1-0.7.
2020-10-06 00:34:56 +02:00
5412da848e
gnu: r-activedriverwgs: Update to 1.1.1.
...
* gnu/packages/bioconductor.scm (r-activedriverwgs): Update to 1.1.1.
2020-10-06 00:34:56 +02:00
1628d57bb5
gnu: Fix package references.
...
* gnu/packages/algebra.scm (iml)[inputs]: Correctly refer to package
inputs.
* gnu/packages/astronomy.scm (xplanet),
* gnu/packages/audio.scm (redkite, libaudec, lv2lint, lv2toweb),
* gnu/packages/bioconductor.scm (r-cummerbund),
* gnu/packages/chicken.scm (chicken),
* gnu/packages/conky.scm (conky),
* gnu/packages/cran.scm (r-latex2exp),
* gnu/packages/crates-io.scm (rust-rgb),
* gnu/packages/databases.scm (mariadb),
* gnu/packages/diffoscope.scm (reprotest),
* gnu/packages/file-systems.scm (glusterfs),
* gnu/packages/finance.scm (electron-cash),
* gnu/packages/games.scm (rinutils, ksudoku, kdiamond, kigo),
* gnu/packages/geo.scm (grass),
* gnu/packages/gnome.scm (libmediaart, gnome-contacts, geoclue),
* gnu/packages/gnucash.scm (aqbanking),
* gnu/packages/image.scm (mtpaint),
* gnu/packages/kde-internet.scm (kopete, ktorrent),
* gnu/packages/kde-utils.scm (kmousetool, kmouth, kronometer),
* gnu/packages/linphone.scm (liblinphone),
* gnu/packages/maths.scm (ppl),
* gnu/packages/mercury.scm (mercury-minimal),
* gnu/packages/music.scm (bjumblr, bschaffl, lsp-plugins,
spectacle-analyzer, helm, tap-lv2, wolf-shaper, shiru-lv2),
* gnu/packages/networking.scm (restinio),
* gnu/packages/prolog.scm (swi-prolog),
* gnu/packages/python-web.scm (gunicorn),
* gnu/packages/python-xyz.scm (python-docusign-esign),
* gnu/packages/ruby.scm (ruby-cucumber, ruby_version, ruby-addressable),
* gnu/packages/sagemath.scm (python-cypari2),
* gnu/packages/skarnet.scm (s6-linux-init),
* gnu/packages/vpn.scm (sshuttle),
* gnu/packages/web.scm (libcyaml),
* gnu/packages/xdisorg.scm (kbdd),
* gnu/packages/xorg.scm (xpra): Same.
2020-09-30 09:28:26 +03:00
871539f3ad
gnu: r-chippeakanno: Update to 3.22.4.
...
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.22.4.
2020-09-28 17:06:56 +02:00
7230f6d5dd
gnu: Fix typoes in package descriptions.
...
* gnu/packages/audio.scm (caps-plugins-lv2)[synopsis]: Fix typo.
* gnu/packages/bioconductor.scm (r-karyoploter, r-anota, r-gcrma)
(r-bigmemoryextras)[description]: Likewise.
* gnu/packages/cran.scm (r-geometry)[synopsis]: Likewise.
(r-stringdist, r-patchwork, r-depth, r-tea)[description]: Likewise.
* gnu/packages/crates-io.scm (rust-assert-fs-0.11, rust-notify-4)
(rust-tokio-fs-0.1)[synopsis, description]: Likewise.
(rust-blas-sys-0.7)[description]: Likewise.
(rust-fs-extra-1.1, rust-xattr-0.2)[synopsis]: Likewise.
* gnu/packages/databases.scm (perl-mysql-config)[description]: Likewise.
* gnu/packages/disk.scm (hddtemp)[description]: Likewise.
* gnu/packages/django.scm (python-djangorestframework)[description]:
Likewise.
* gnu/packages/documentation.scm (doc++)[description]: Likewise.
* gnu/packages/emacs-xyz.scm (emacs-kakoune, emacs-pyim-basedict, eless)
(emacs-scpaste)[description]: Likewise.
* gnu/packages/file-systems.scm (dbxfs)[description]: Likewise.
* gnu/packages/finance.scm (python-stdnum)[description]: Likewise.
* gnu/packages/fontutils.scm (woff2)[description]: Likewise.
* gnu/packages/games.scm (openttd-opengfx)[description]: Likewise.
* gnu/packages/gnome-xyz.scm (gnome-shell-extension-topicons-redux)
[description]: Likewise.
* gnu/packages/gnome.scm (libgrss)[description]: Likewise.
* gnu/packages/golang.scm (go-github-com-mitchellh-reflectwalk)
[description]: Likewise.
(go-github-com-go-git-go-billy)[synopsis, description]: Likewise.
* gnu/packages/haskell-check.scm (ghc-inspection-testing)[description]:
Likewise.
* gnu/packages/haskell-web.scm (ghc-yesod-form)[description]: Likewise.
* gnu/packages/haskell-xyz.scm (ghc-hex)[description]: Likewise.
* gnu/packages/hyperledger.scm (hyperledger-iroha-ed25519)[description]:
Likewise.
* gnu/packages/java.scm (java-mail)[synopsis]: Likewise.
(java-native-access-platform)[description]: Likewise.
* gnu/packages/kde-frameworks.scm (kactivities-stats)[description]:
Likewise.
* gnu/packages/kde-utils.scm (krusader)[description]: Likewise.
* gnu/packages/language.scm (praat)[description]: Likewise.
* gnu/packages/linux.scm (light)[description]: Likewise.
* gnu/packages/lisp-xyz.scm (sbcl-hu.dwim.defclass-star)[description]:
Likewise.
* gnu/packages/mail.scm (dovecot-trees, sieve-connect)[description]:
Likewise.
* gnu/packages/ocaml.scm (ocaml-opam-file-format, ocaml-cppo)
(ocaml4.07-ppx-variants-conv)[description]: Likewise.
* gnu/packages/perl.scm (perl-convert-binhex)[description]: Likewise.
* gnu/packages/python-crypto.scm (python-ecdsa)[description]: Likewise.
* gnu/packages/python-web.scm (python-html5lib)[synopsis, description]:
Likewise.
(python-venusian)[synopsis]: Likewise.
* gnu/packages/python-xyz.scm (python-readlike, python-gssapi)
(python-flufl-i18n)[description]: Likewise.
(python-pox, python-watchdog, python-xattr)[synopsis, description]:
Likewise.
* gnu/packages/ruby.scm (ruby-sorcerer)[description]: Likewise.
* gnu/packages/rust-apps.scm (watchexec)[description]: Likewise.
* gnu/packages/rust.scm (mrustc)[synopsis]: Likewise.
* gnu/packages/shells.scm (s-shell)[description]: Likewise.
* gnu/packages/ssh.scm (sshpass)[description]: Likewise.
* gnu/packages/terminals.scm (beep)[description]: Likewise.
* gnu/packages/web.scm (perl-lwp-useragent-cached)[description]:
Likewise.
* gnu/packages/wv.scm (wv)[description]: Likewise.
2020-09-23 04:37:01 +02:00
Mădălin Ionel Patrașcu
Ricardo Wurmus
zimoun
Roel Janssen
Efraim Flashner
Tobias Geerinckx-Rice