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Author SHA1 Message Date
Efraim Flashner e0f43c6a27
gnu: elfutils: Skip 3 more tests on riscv64-linux. 
* gnu/packages/elf.scm (elfutils)[arugments]: When building for
riscv64-linux skip 3 more failing tests.
 2023-04-18 11:00:47 +03:00
John Kehayias a5c4b50c36
gnu: python-google-auth: Update to 2.17.3. 
* gnu/packages/python-web.scm (python-google-auth): Update to 2.17.3.
[native-inputs]: Add python-mock.
 2023-04-18 00:45:36 -04:00
John Kehayias 3e8d608dac
gnu: python-urllib3: Update to 1.26.15. 
* gnu/packages/python-web.scm (python-urllib3): Update to 1.26.15.
 2023-04-18 00:40:16 -04:00
John Kehayias f2797f18c2
gnu: python-oauth2client: Fix build. 
* gnu/packages/python-web.scm (python-oauth2client)[propagated-inputs]: Add
python-pyparsing.
 2023-04-18 00:25:12 -04:00
John Kehayias f2cc76c809
gnu: python-httplib2: Update to 0.22.0. 
* gnu/packages/python-web.scm (python-httplib2): Update to 0.22.0.
[build-system]: Switch to pyproject-build-system.
[native-inputs]: Add python-cryptography.
 2023-04-18 00:19:51 -04:00
John Kehayias aaf85222f1
gnu: python-pytest-localserver: Update to 0.7.1. 
* gnu/packages/check.scm (python-pytest-localserver): Update to 0.7.1.
 2023-04-18 00:11:52 -04:00
Andreas Enge a6d2b54d39
gnu: Clean up merge errors. 
* gnu/packages/gstreamer.scm (gst-plugins-base, gst-plugins-good,
gst-plugins-bad, gst-plugins-ugly, gst-editing-services, python-gst): Use
standard meson instead of non-existing meson-0.63.
 2023-04-17 20:58:30 +02:00
Andreas Enge 216d7bdb73
Merge remote-tracking branch 'origin/master' into core-updates 2023-04-17 19:17:39 +02:00
Guillaume Le Vaillant 50dd91bc30
gnu: gqrx: Update to 2.15.10. 
* gnu/packages/radio.scm (gqrx): Update to 2.15.10.
 2023-04-17 17:35:50 +02:00
Sharlatan Hellseher d3ce883304
gnu: wfview: Update to 1.62. 
* gnu/packages/radio.scm (wfview): Update to 1.62.
  Use Gexp, shift order of components.
  [inputs]: Add hidapi, qtgamepad.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2023-04-17 17:19:29 +02:00
Christopher Baines 00b5c37e34
gnu: guix-build-coordinator: Update to 0-78.2efcd8b. 
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-78.2efcd8b.
 2023-04-17 15:56:59 +01:00
Christopher Baines e5c33837cb
self: Restructure accessing packages. 
Both for consistency (always use specification->package as defined in this
module) and so that all the packages that are used can be accessed (which
comes in useful when applying grafts).

* guix/self.scm (%packages): New variable.
(specification->package): Use %packages.
(locale-data, translate-texi-manuals, info-manual, guix-command,
compiled-guix): Use specification->package.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-04-17 15:39:42 +01:00
Christopher Baines 095754ea88
packages: Export guile-for-grafts. 
So this can be used in (guix self).

* guix/packages.scm (guile-for-grafts): Export.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-04-17 15:39:40 +01:00
Guillaume Le Vaillant d3c7ca3c40
gnu: python-qscintilla: Fix build. 
* gnu/packages/qt.scm (python-qscintilla)[build-system]: Swith to
  pyproject-build-system.
  [arguments]: Update 'configure-flags'. Delete custom 'configure' phase. Add
  'prepare-build' and 'set-include-dirs' phases.
  [native-inputs]: Add python-pyqt-builder and qtbase-5.
  [inputs]: Add python-sip.
 2023-04-17 15:23:49 +02:00
Guillaume Le Vaillant 924c871ff6
gnu: qscintilla: Update to 2.13.4. 
* gnu/packages/qt.scm (qscintilla): Update to 2.13.4.
 2023-04-17 13:56:43 +02:00
Nicolas Goaziou 2d06dfc050
gnu: emacs-wordgen: Fix build on 32-bit platforms. 
* gnu/packages/emacs-xyz.scm (emacs-wordgen)[arguments]<#:emacs>: Use
EMACS-WIDE-INT on 32-bit platforms.
 2023-04-17 13:30:10 +02:00
Lars-Dominik Braun 89acc4d5c6
gnu: r-mixedpower: Update to b2b87068. 
* gnu/packages/statistics.scm (r-mixedpower): Update to commit
b2b87068546327d8f592d141e5482e0478c1b2ee, remove patch.
* gnu/packages/patches/r-mixedpower-r2power.patch: Remove file.
* gnu/local.mk: Unregister it.
 2023-04-17 11:55:30 +02:00
Guillaume Le Vaillant 1c86be2fd6
gnu: mysql: Fix build. 
The version of mysql currently packaged doesn't support openssl-3.

* gnu/packages/databases.scm (mysql)[inputs]: Replace openssl by openssl-1.1.
 2023-04-17 11:55:12 +02:00
Guillaume Le Vaillant c0723849b5
gnu: cl-burgled-batteries3: Fix build. 
* gnu/packages/lisp-xyz.scm (sbcl-burgled-batteries3)[arguments]: Rename
  'adjust-for-python-3.9' phase to 'adjust-for-python-3.10' and update it.
 2023-04-17 11:41:39 +02:00
Kyle Andrews a117510a8c
gnu: Add r-littler. 
* gnu/packages/cran.scm (r-littler): New variable.
 2023-04-17 11:35:29 +02:00
Guillaume Le Vaillant b6ffcc4de4
gnu: cl-ana: Fix build. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-ana)[arguments]: Use gexp. Update
  'fix-paths' phase. Add 'fix-newer-hdf5-compatibility' phase.
 2023-04-17 11:28:45 +02:00
Guillaume Le Vaillant a2ed9816c9
gnu: cl-hdf5-cffi: Fix build. 
* gnu/packages/lisp-xyz.scm (sbcl-hdf5-cffi)[inputs]: Remove labels.
  [arguments]: Use gexp, add 'fix-newer-hdf5-compatibility' phase.
 2023-04-17 11:16:58 +02:00
Navid Afkhami b95cd3f969
gnu: Add r-demuxmix. 
* gnu/packages/bioinformatics.scm (r-demuxmix): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2023-04-17 11:16:30 +02:00
Navid Afkhami 2b2068a083
gnu: Add r-demultiplex2. 
* gnu/packages/bioinformatics.scm (r-demultiplex2): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2023-04-17 11:14:30 +02:00
Ricardo Wurmus 83fb491e44
gnu: r-simr: Update to 1.0.7. 
* gnu/packages/statistics.scm (r-simr): Update to 1.0.7.
 2023-04-17 11:11:17 +02:00
Ricardo Wurmus eee0b6075a
gnu: r-quantreg: Update to 5.95. 
* gnu/packages/statistics.scm (r-quantreg): Update to 5.95.
 2023-04-17 11:11:17 +02:00
Ricardo Wurmus 8159838e81
gnu: r-deoptimr: Update to 1.0-12. 
* gnu/packages/statistics.scm (r-deoptimr): Update to 1.0-12.
 2023-04-17 11:11:17 +02:00
Ricardo Wurmus 303acb3a0b
gnu: r-segmented: Update to 1.6-4. 
* gnu/packages/statistics.scm (r-segmented): Update to 1.6-4.
 2023-04-17 11:11:17 +02:00
Ricardo Wurmus 7e80f058ca
gnu: r-git2r: Update to 0.32.0. 
* gnu/packages/statistics.scm (r-git2r): Update to 0.32.0.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus 5507db7ee0
gnu: r-markdown: Update to 1.6. 
* gnu/packages/statistics.scm (r-markdown): Update to 1.6.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus ca6f22f63b
gnu: r-stars: Update to 0.6-1. 
* gnu/packages/cran.scm (r-stars): Update to 0.6-1.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus 68355cf37b
gnu: r-seqminer: Update to 8.9. 
* gnu/packages/cran.scm (r-seqminer): Update to 8.9.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus 853fd0f2c3
gnu: r-parsnip: Update to 1.1.0. 
* gnu/packages/cran.scm (r-parsnip): Update to 1.1.0.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus 648f92a434
gnu: r-workflowsets: Update to 1.0.1. 
* gnu/packages/cran.scm (r-workflowsets): Update to 1.0.1.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus d2d6ea993e
gnu: r-tune: Update to 1.1.1. 
* gnu/packages/cran.scm (r-tune): Update to 1.1.1.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus d495c46698
gnu: r-igraph: Update to 1.4.2. 
* gnu/packages/cran.scm (r-igraph): Update to 1.4.2.
[propagated-inputs]: Add r-cpp11.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus 075a045b41
gnu: r-confintr: Update to 1.0.0. 
* gnu/packages/cran.scm (r-confintr): Update to 1.0.0.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus 679c78ed51
gnu: r-spatstat-linnet: Update to 3.1-0. 
* gnu/packages/cran.scm (r-spatstat-linnet): Update to 3.1-0.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus 3113ee8bba
gnu: r-rstanarm: Update to 2.21.4. 
* gnu/packages/cran.scm (r-rstanarm): Update to 2.21.4.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus d8e3aa95a0
gnu: r-quanteda: Update to 3.3.0. 
* gnu/packages/cran.scm (r-quanteda): Update to 3.3.0.
[propagated-inputs]: Add r-jsonlite.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus 374639c34a
gnu: r-qqconf: Update to 1.3.2. 
* gnu/packages/cran.scm (r-qqconf): Update to 1.3.2.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus 6655a2af0f
gnu: r-terra: Update to 1.7-23. 
* gnu/packages/cran.scm (r-terra): Update to 1.7-23.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus b039d0a7c4
gnu: r-enrichr: Update to 3.2. 
* gnu/packages/cran.scm (r-enrichr): Update to 3.2.
[propagated-inputs]: Add r-writexls.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus 776154da00
gnu: r-scs: Update to 3.2.4. 
* gnu/packages/cran.scm (r-scs): Update to 3.2.4.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus 185bb03286
gnu: r-rms: Update to 6.6-0. 
* gnu/packages/cran.scm (r-rms): Update to 6.6-0.
[propagated-inputs]: Remove r-lattice; add r-kableextra and r-knitr.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus b9d6b88a33
gnu: r-compositions: Update to 2.0-6. 
* gnu/packages/cran.scm (r-compositions): Update to 2.0-6.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus 39d2ed401f
gnu: r-gargle: Update to 1.4.0. 
* gnu/packages/cran.scm (r-gargle): Update to 1.4.0.
[propagated-inputs]: Remove r-rstudioapi.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus 51ae3aabee
gnu: r-performance: Update to 0.10.3. 
* gnu/packages/cran.scm (r-performance): Update to 0.10.3.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus 726b352cec
gnu: r-bayestestr: Update to 0.13.1. 
* gnu/packages/cran.scm (r-bayestestr): Update to 0.13.1.
 2023-04-17 11:11:16 +02:00
Ricardo Wurmus 2a1de6dc13
gnu: r-multcompview: Update to 0.1-9. 
* gnu/packages/cran.scm (r-multcompview): Update to 0.1-9.
 2023-04-17 11:11:16 +02:00