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Author SHA1 Message Date
Lars-Dominik Braun eebb0bfd68
gnu: python-sip: Update to 6.7.7. 
* gnu/packages/patches/python-sip-include-dirs.patch: New file.
* gnu/local.mk: Add it.
* gnu/packages/qt.scm (python-sip): Update to 6.7.7.
[propagated-inputs]: Add python-ply.
[source]: Use patch.
 2023-03-30 11:54:31 +02:00
Guillaume Le Vaillant c10bfa8885
gnu: ucx: Update to 1.14.0. 
* gnu/packages/fabric-management.scm (ucx): Update to 1.14.0.
* gnu/packages/patches/ucx-tcp-iface-ioctl.patch: Adapt patch to new ucx
  version.
 2023-03-27 11:34:50 +02:00
Guillaume Le Vaillant 0ac126e4f2
gnu: psm2: Update to 11.2.230. 
* gnu/packages/linux.scm (psm2): Update to 11.2.230.
 2023-03-27 11:19:58 +02:00
Guillaume Le Vaillant dcb0007ca0
gnu: vtk: Don't pin to proj-7. 
* gnu/packages/image-processing.scm (vtk)[inputs]: Replace proj-7 by proj.
 2023-03-27 11:19:58 +02:00
Josselin Poiret 68793b702e
gnu: u-boot: Fix build under Python 3.10. 
* gnu/packages/patches/u-boot-fix-build-python-3.10.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/bootloaders.scm (u-boot): Apply patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-26 22:19:29 +02:00
Josselin Poiret 2a4fa1d127
gnu: opensbi: Build with default gcc, with microarch rv64g. 
* gnu/packages/firmware.scm (make-opensbi-package): Remove specific #:xgcc for
the cross-toolchain, there is not reason for it now.  Also set the microarch to
rv64g, so that it builds.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-26 22:19:26 +02:00
Guillaume Le Vaillant ef7ddc8e8b
gnu: qtquickcontrols2-5: Fix source hash. 
* gnu/packages/qt.scm (qtquickcontrols2-5)[source]: Fix hash.
 2023-03-25 22:58:58 +01:00
Guillaume Le Vaillant 2dd0101de9
gnu: python-pyzmq: Update to 25.0.2. 
* gnu/packages/python-xyz.scm (python-pyzmq): Update to 25.0.2.
  [source]: Update snippet.
  [arguments]: Add 'disable-draft-test' phase.
  [native-inputs]: Add python-pytest-asyncio and python-tornado.
 2023-03-25 20:41:51 +01:00
Guillaume Le Vaillant e0840701eb
gnu: volk: Update to 3.0.0. 
* gnu/packages/engineering.scm (volk): Update to 3.0.0.
  [arguments]: Add 'disable-check-lgpl-test' phase. Remove trailing booleans.
  [license]: Replace gpl3+ by lgpl3+. Add asl2.0.
 2023-03-25 19:23:44 +01:00
Guillaume Le Vaillant 9e0942f7a4
gnu: cl-cffi-gtk: Update to 3.8.8-3.1700fe6. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk): Update to 3.8.8-3.1700fe6.
  [source,home-page]: Switch to active repository.
  [inputs]: Remove labels.
  [arguments]: Update 'fix-paths' phase.
 2023-03-25 15:09:06 +01:00
Guillaume Le Vaillant 073e98a422
gnu: cl-cffi: Update to 0.24.1-1.3397035. 
* gnu/packages/lisp-xyz.scm (sbcl-cffi): Update to 0.24.1-1.3397035.
  [arguments]: Remove 'fix-arm-support' phase. Update 'fix-paths' phase.
 2023-03-25 14:12:35 +01:00
Maxim Cournoyer 1415d964ab
gnu: python-pre-commit: Move deprecated variable next to replacement. 
This fixes a module import dependency cycle, which was introduced in
831baaf81e ("gnu: python-pre-commit: Replace
with pre-commit.").  The rule of thumb to avoid these is that the deprecated
package should live next to the replacement package (in the same module).

* gnu/packages/python-xyz.scm (python-pre-commit): Move to...
* gnu/packages/version-control.scm (python-pre-commit): ... here.
 2023-03-23 10:00:25 -04:00
Kaelyn Takata 0e2e1ffc95
gnu: git: Fix missing native-inputs after commit ccb62d8feb. 
* gnu/packages/version-control.scm (git)[native-inputs]: Restore
native-inputs to what they were prior to the merge commit ccb62d8feb.

Signed-off-by: Andreas Enge <andreas@enge.fr>
 2023-03-21 15:18:56 +01:00
Josselin Poiret a973e1484d
gnu: gnulib: Depend on git-minimal/pinned. 
* gnu/packages/build-tools.scm (gnulib)[native-inputs]: Change git to
git-minimal/pinned.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-20 23:57:23 +01:00
Andreas Enge bfe569e84b
Merge remote-tracking branch 'origin/master' into core-updates 2023-03-20 19:03:39 +01:00
Andreas Enge 30f4b3a7e8
gnu: openjdk10: Apply patch again. 
This partially reverts commit 7636c49b45
where the patch was dropped.

* gnu/packages/java.scm (openjdk10)[source]: Apply patch.
 2023-03-20 19:00:02 +01:00
Andreas Enge ccb62d8feb
Merge remote-tracking branch 'origin/master' into core-updates 2023-03-20 18:49:06 +01:00
Mădălin Ionel Patrașcu 2336d5f57a
gnu: Add r-annotationhubdata. 
* gnu/packages/bioconductor.scm (r-annotationhubdata): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2023-03-20 18:25:10 +01:00
Mădălin Ionel Patrașcu 40b79eafee
gnu: Add r-affylmgui. 
* gnu/packages/bioconductor.scm (r-affylmgui): New variable.
 2023-03-20 18:25:10 +01:00
Mădălin Ionel Patrașcu 628c22ec9e
gnu: Add r-tkrplot. 
* gnu/packages/cran.scm (r-tkrplot): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>.
 2023-03-20 18:25:10 +01:00
Mădălin Ionel Patrașcu 9f09ac6b21
gnu: Add r-affyplm. 
* gnu/packages/bioconductor.scm (r-affyplm): New variable.
 2023-03-20 18:25:10 +01:00
Mădălin Ionel Patrașcu 284b5eca60
gnu: Add r-affyilm. 
* gnu/packages/bioconductor.scm (r-affyilm): New variable.
 2023-03-20 18:25:10 +01:00
Efraim Flashner f80215c7c4
gnu: python-google-api-client: Update to 1.12.8. 
* gnu/packages/python-web.scm (python-google-api-client): Update to
1.12.8.
[arguments]: Remove custom phase to adjust setup.py.
[native-inputs]: Remove python-oauth2client, python-uritemplate. Move
python-httplib2, python-six ...
[propagated-inputs]: ... here. Add python-google-api-core-1,
python-google-auth-1, python-google-auth-httplib2, python-uritemplate-3.
 2023-03-20 18:27:45 +02:00
Efraim Flashner f541989f95
gnu: python-googleapis-common-protos: Update to 1.56.4. 
* gnu/packages/python-web.scm (python-googleapis-common-protos): Update
to 1.56.4.
[arguments]: Enable test suite.
 2023-03-20 18:27:44 +02:00
Efraim Flashner 86f1a3643e
gnu: Add python-google-api-core-1. 
* gnu/packages/python-web.scm (python-google-api-core-1): New variable.
 2023-03-20 18:27:44 +02:00
Efraim Flashner e0deaf0a85
gnu: Add python-google-auth-1. 
* gnu/packages/python-web.scm (python-google-auth-1): New variable.
 2023-03-20 18:27:44 +02:00
Efraim Flashner a39aac3352
gnu: Add python-google-auth-httplib2. 
* gnu/packages/python-web.scm (python-google-auth-httplib2): New
variable.
 2023-03-20 18:27:44 +02:00
Efraim Flashner 6ec585fb3e
gnu: Add python-uritemplate-3. 
* gnu/packages/python-web.scm (python-uritemplate-3): New variable.
 2023-03-20 18:27:43 +02:00
Efraim Flashner 0f4800e93a
gnu: python-httplib2: Update to 0.15.0. 
* gnu/packages/python-web.scm (python-httplib2): Update to 0.15.0.
[source]: Download using git.
[arguments]: Add a phase to adjust the test package version
requirements.
[native-inputs]: Add python-flake8, python-future, python-mock,
python-pytest, python-pytest-cov, python-pytest-forked,
python-pytest-randomly, python-pytest-timeout, python-pytest-xdist,
python-six.
[home-page]: Switch to new upstream homepage.
 2023-03-20 18:27:43 +02:00
Efraim Flashner 9d93c0c789
gnu: zig: Increase max-silent-time. 
* gnu/packages/zig.scm (zig-0.10)[properties]: Set max-silent-time to 3
hours.
 2023-03-20 18:27:40 +02:00
Ricardo Wurmus 5dcbe80da8
gnu: Add transanno. 
* gnu/packages/bioinformatics.scm (transanno): New variable.
 2023-03-20 17:22:33 +01:00
Ricardo Wurmus 6a1638fe97
gnu: Add rust-autocompress-0.2. 
* gnu/packages/crates-io.scm (rust-autocompress-0.2): New variable.
 2023-03-20 17:22:33 +01:00
Ricardo Wurmus cc2f5cd998
gnu: Add rust-temp-testdir-0.2. 
* gnu/packages/crates-io.scm (rust-temp-testdir-0.2): New variable.
 2023-03-20 17:22:33 +01:00
Ricardo Wurmus 50e63a675b
gnu: Add rust-bio-0.41. 
* gnu/packages/crates-io.scm (rust-bio-0.41): New variable.
 2023-03-20 17:22:33 +01:00
Andreas Enge 098bd280f8
gnu: procps: Fix test failure on i686. 
* gnu/packages/patches/procps-strtod-test.patch: New file.
* gnu/packages/linux.scm (procps): Add patch.
* gnu/local.mk (dist_patch_DATA): Register patch.
 2023-03-20 16:59:27 +01:00
Andreas Enge f774aa2d17
gnu: procps: Update to 4.0.3. 
* gnu/packages/linux.scm (procps): Update to 4.0.3.
[native-inputs]: Add pkg-config.
 2023-03-20 16:34:09 +01:00
Maxim Cournoyer 45fd01ac5d
gnu: ruby-rugged: Update to 1.6.2-0.6379f23 and enable tests. 
* gnu/packages/ruby.scm (ruby-rugged): Update to 1.6.2-0.6379f23.
[source]: Fetch via git.
[arguments]: Enable tests.  Add #:phases.
[native-inputs]: Add git-minimal/pinned.  Remove ruby-minitest and ruby-pry.
 2023-03-20 11:12:18 -04:00
Maxim Cournoyer 008a2f1803
gnu: python-django-rq: Update to 2.7.0. 
* gnu/packages/django.scm (python-django-rq): Update to 2.7.0.
[arguments]: Replace django-admin.py with django-admin in check phase.
 2023-03-20 08:38:20 -04:00
Maxim Cournoyer 10d5535c78
gnu: python-aioredis: Deprecate by python-redis. 
* gnu/packages/databases.scm (python-aioredis): Mark as deprecated by
python-redis.
 2023-03-20 08:38:19 -04:00
Maxim Cournoyer c3b110b27a
gnu: python-fakeredis: Update to 2.10.1 and enable tests. 
* gnu/packages/databases.scm (python-fakeredis): Update to 2.10.1.
[source]: Fetch via git.
[build-system]: Use pyproject-build-system.
[arguments]: Enable tests.  Add #:phases.
[native-inputs]: New field.
[propagated-inputs]: Remove python-aioredis and python-packaging.
[home-page]: Update URL.
 2023-03-20 08:38:19 -04:00
Maxim Cournoyer 1a902eb21a
gnu: python-redis: Update to 4.5.2 and enable tests. 
* gnu/packages/databases.scm (python-redis): Update to 4.5.2.
[source]: Fetch from git.
[build-system]: Use pyproject-build-system.
[arguments]: Enable tests.  Add #:test-flags and #:phases.
[native-inputs]: Add field.
[propagated-inputs]: Add field.
[home-page]: Update URL.
 2023-03-20 08:38:07 -04:00
Maxim Cournoyer 20fa738123
gnu: python-hiredis: Update to 2.2.2 and enable tests. 
* gnu/packages/databases.scm (python-hiredis): Update to 2.2.2.
[source]: Fetch via git and apply patches.
[build-system]: Use pyproject-build-system.
[arguments]: Enable tests.  Add #:phases.
[native-inputs]: New field.
[inputs]: Likewise.
* gnu/packages/patches/python-hiredis-fix-header.patch: New file.
* gnu/packages/patches/python-hiredis-use-system-hiredis.patch: Likewise.
* gnu/local.mk (dist_patch_DATA): Register them.
 2023-03-20 08:32:32 -04:00
Maxim Cournoyer 9956638943
gnu: hiredis: Update to 1.1.0. 
* gnu/packages/databases.scm (hiredis): Update to 1.1.0.
 2023-03-20 08:32:32 -04:00
Maxim Cournoyer 4413b09fa3
gnu: redis: Use gexps and streamline. 
* gnu/packages/databases.scm (redis) [arguments]: Merge the use-correct-tclsh
into the patch-paths phase.  Use 'which' instead of assoc-ref.  Move
the #:make-flags argument before the #:phases one.  Use cc-for-target as the
value of the CC make flag.
[native-inputs]: Move field below arguments.
 2023-03-20 08:32:31 -04:00
Maxim Cournoyer 458b791f35
gnu: redis: Update to 7.0.9 [security fixes]. 
Fixes CVE-2023-25155, CVE-2022-36021 and more; see
https://raw.githubusercontent.com/redis/redis/7.0/00-RELEASENOTES.

* gnu/packages/databases.scm (redis): Update to 7.0.9.
[native-inputs]: Add pkg-config and which.
[arguments]: Add a patch-paths phase.  Skip the AOF-related tests.
[properties]: Add a lint-hidden-cve property.
 2023-03-20 08:32:31 -04:00
Andrew Tropin 3a2200e1ad
services: network-manager: Add missing shadowing of 'iwd?' field. 
* gnu/services/networking.scm (network-manager-shepherd-service): Add missing
shadowing of 'iwd?' field by using let* instead of let.
 2023-03-20 12:08:36 +04:00
Sergey Trofimov 1f36534c7e
home: 'home-environment-with-provenance' uses the HE location info. 
* gnu/home.scm (home-environment-with-provenance): Make `config-file`
optional, with the default taken from the HE location info.

Signed-off-by: Andrew Tropin <andrew@trop.in>
 2023-03-20 09:14:23 +04:00
conses d429ff12e5
gnu: emacs-eshell-syntax-highlighting: Update to 0.3-0.1ba39a9. 
* gnu/packages/emacs-xyz.scm (emacs-eshell-syntax-highlighting): Update to
0.3-0.1ba39a9.

Signed-off-by: Andrew Tropin <andrew@trop.in>
 2023-03-20 09:11:04 +04:00
Andrew Tropin 8f5f505d90
gnu: Add emacs-geiser-eros. 
* gnu/packages/emacs-xyz.scm (emacs-geiser-eros): New variable.
 2023-03-20 09:10:37 +04:00
Leo Famulari 80d31a7478
gnu: linux-libre: Update kernel configs for 6.2.7. 
* gnu/packages/aux-files/linux-libre/6.2-arm.conf,
gnu/packages/aux-files/linux-libre/6.2-arm64.conf,
gnu/packages/aux-files/linux-libre/6.2-i686.conf,
gnu/packages/aux-files/linux-libre/6.2-x86_64.conf: Set some new configuration
options.
 2023-03-19 18:01:00 -04:00