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1836 Commits (04680bfb0f7fb312b4afed7b8ddc2dc8b6b413f9)

Author SHA1 Message Date
Ricardo Wurmus b28cd884b8
gnu: r-gdsfmt: Adjust bad substitution.
* gnu/packages/bioconductor.scm (r-gdsfmt)[source]: Include beginning-of-line
anchor in substitution regular expression.
2021-09-30 12:39:49 +02:00
Ricardo Wurmus 0398a89fa1
gnu: r-delayedmatrixstats: Update to 1.14.3.
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.14.3.
2021-09-30 12:39:49 +02:00
Ricardo Wurmus 425c53b568
gnu: r-s4vectors: Update to 0.30.1.
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.30.1.
2021-09-30 12:39:49 +02:00
Ricardo Wurmus c935b25a9e
gnu: r-biocpkgtools: Update to 1.10.2.
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.10.2.
[propagated-inputs]: Remove r-rex.
2021-09-30 12:39:49 +02:00
Ricardo Wurmus 3683f7f0a8
gnu: r-timeseriesexperiment: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-timeseriesexperiment): Update to 1.10.1.
2021-09-30 12:39:48 +02:00
Ricardo Wurmus 74e2186731
gnu: r-gdsfmt: Update to 1.28.1.
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.28.1.
2021-09-30 12:39:48 +02:00
Ricardo Wurmus 494b7c4eca
gnu: r-cicero: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.10.1.
2021-09-30 12:39:48 +02:00
Ricardo Wurmus 3278daa726
gnu: r-zinbwave: Update to 1.14.2.
* gnu/packages/bioconductor.scm (r-zinbwave): Update to 1.14.2.
2021-09-30 12:39:48 +02:00
Ricardo Wurmus a88e7abf2f
gnu: r-clusterprofiler: Update to 4.0.5.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.0.5.
[propagated-inputs]: Remove r-rvcheck; add r-yulab-utils.
2021-09-30 12:39:48 +02:00
Ricardo Wurmus 1359fc7fbd
gnu: r-ggtree: Update to 3.0.4.
* gnu/packages/bioconductor.scm (r-ggtree): Update to 3.0.4.
[propagated-inputs]: Remove r-rvcheck; add r-ggfun and r-yulab-utils.
2021-09-30 12:39:48 +02:00
Ricardo Wurmus 538618552b
gnu: r-matrixgenerics: Update to 1.4.3.
* gnu/packages/bioconductor.scm (r-matrixgenerics): Update to 1.4.3.
2021-09-30 12:39:48 +02:00
Ricardo Wurmus ce23a074f0
gnu: r-chippeakanno: Update to 3.26.4.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.26.4.
2021-09-30 12:39:48 +02:00
Ricardo Wurmus 4fb187b79e
gnu: r-diffbind: Update to 3.2.7.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.2.7.
2021-09-30 12:39:47 +02:00
Ricardo Wurmus 43ac163bdf
gnu: r-genomicfeatures: Update to 1.44.2.
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.44.2.
2021-09-30 12:39:47 +02:00
Ricardo Wurmus 7c6046a6db
gnu: r-genomeinfodb: Update to 1.28.4.
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.28.4.
2021-09-30 12:39:47 +02:00
Ricardo Wurmus 0ac7b8b6ad
gnu: r-edger: Update to 3.34.1.
* gnu/packages/bioconductor.scm (r-edger): Update to 3.34.1.
2021-09-30 12:39:47 +02:00
Ricardo Wurmus 77a5fdd51c
gnu: r-biocparallel: Update to 1.26.2.
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.26.2.
2021-09-30 12:39:47 +02:00
Ricardo Wurmus e8aab58d0c
gnu: r-affxparser: Update to 1.64.1.
* gnu/packages/bioconductor.scm (r-affxparser): Update to 1.64.1.
2021-09-30 12:39:47 +02:00
Tobias Geerinckx-Rice 708fe49523
gnu: r-simplifyenrichment: Fix typo in description.
* gnu/packages/bioconductor.scm (r-simplifyenrichment)[description]:
Fix ‘implemeted’ typo.
2021-09-28 22:00:48 +02:00
Ricardo Wurmus ca962b5ba9
gnu: Add r-omnipathr.
* gnu/packages/bioconductor.scm (r-omnipathr): New variable.
2021-09-23 14:46:49 +02:00
zimoun 8e54aafa39
gnu: Add r-simplifyenrichment.
* gnu/packages/bioconductor.scm (r-simplifyenrichment): New variable.
2021-09-20 17:23:15 +02:00
Ricardo Wurmus 5cfe5ddece
gnu: Add r-biscuiteer.
* gnu/packages/bioconductor.scm (r-biscuiteer): New variable.
2021-09-07 14:47:57 +02:00
Ricardo Wurmus f051f68ca2
gnu: Add r-dmrseq.
* gnu/packages/bioconductor.scm (r-dmrseq): New variable.
2021-09-07 14:47:57 +02:00
Ricardo Wurmus 0d1990b986
gnu: Add r-bsseq.
* gnu/packages/bioconductor.scm (r-bsseq): New variable.
2021-09-07 14:47:57 +02:00
Ricardo Wurmus b63fb6a2e6
gnu: Add r-biotmle.
* gnu/packages/bioconductor.scm (r-biotmle): New variable.
2021-09-07 14:47:57 +02:00
Ricardo Wurmus ccc1b9e5a1
gnu: Add r-biotip.
* gnu/packages/bioconductor.scm (r-biotip): New variable.
2021-09-07 14:47:57 +02:00
Ricardo Wurmus 32d8a7d3ba
gnu: Add r-bioqc.
* gnu/packages/bioconductor.scm (r-bioqc): New variable.
2021-09-07 14:47:56 +02:00
Ricardo Wurmus d5f792ac10
gnu: Add r-bionetstat.
* gnu/packages/bioconductor.scm (r-bionetstat): New variable.
2021-09-07 14:47:56 +02:00
Ricardo Wurmus 35526b62a8
gnu: Add r-bionet.
* gnu/packages/bioconductor.scm (r-bionet): New variable.
2021-09-07 14:47:56 +02:00
Ricardo Wurmus 4f6b3821eb
gnu: Add r-bionero.
* gnu/packages/bioconductor.scm (r-bionero): New variable.
2021-09-07 14:47:56 +02:00
Ricardo Wurmus 2794024dc2
gnu: Add r-biomvrcns.
* gnu/packages/bioconductor.scm (r-biomvrcns): New variable.
2021-09-07 14:47:56 +02:00
Ricardo Wurmus 9cb08ead85
gnu: Add r-biomvcclass.
* gnu/packages/bioconductor.scm (r-biomvcclass): New variable.
2021-09-07 14:47:56 +02:00
Ricardo Wurmus e10a3bc0ca
gnu: Add r-mvcclass.
* gnu/packages/bioconductor.scm (r-mvcclass): New variable.
2021-09-07 14:47:56 +02:00
Ricardo Wurmus 0780bcc0c0
gnu: Add r-biscuiteerdata.
* gnu/packages/bioconductor.scm (r-biscuiteerdata): New variable.
2021-09-07 14:47:56 +02:00
Ricardo Wurmus bcbd8b7921
gnu: Add r-mus-musculus.
* gnu/packages/bioconductor.scm (r-mus-musculus): New variable.
2021-09-07 14:47:56 +02:00
Ricardo Wurmus aed1504837
gnu: Add r-biomformat.
* gnu/packages/bioconductor.scm (r-biomformat): New variable.
2021-09-07 12:16:47 +02:00
Ricardo Wurmus 48e300bd3f
gnu: Add r-biodb.
* gnu/packages/bioconductor.scm (r-biodb): New variable.
2021-09-07 12:16:41 +02:00
Ricardo Wurmus 2c8e3595e3
gnu: Add r-biocdockermanager.
* gnu/packages/bioconductor.scm (r-biocdockermanager): New variable.
2021-09-07 12:16:33 +02:00
Ricardo Wurmus 7ca0a0f0e7
gnu: Add r-biocthis.
* gnu/packages/bioconductor.scm (r-biocthis): New variable.
2021-09-07 12:08:17 +02:00
Ricardo Wurmus fd5372e40f
gnu: Add r-basilisk.
* gnu/packages/bioconductor.scm (r-basilisk): New variable.
2021-09-07 12:08:13 +02:00
Ricardo Wurmus dde984ca19
gnu: Add r-basilisk-utils.
* gnu/packages/bioconductor.scm (r-basilisk-utils): New variable.
2021-09-07 12:08:06 +02:00
Ricardo Wurmus c9d545ab01
gnu: Add r-dir-expiry.
* gnu/packages/bioconductor.scm (r-dir-expiry): New variable.
2021-09-07 12:07:59 +02:00
Ricardo Wurmus b76b47ebe4
gnu: Add r-genetclassifier.
* gnu/packages/bioconductor.scm (r-genetclassifier): New variable.
2021-09-07 12:01:25 +02:00
Ricardo Wurmus e43c6d2e4a
gnu: Add r-minet.
* gnu/packages/bioconductor.scm (r-minet): New variable.
2021-09-07 12:01:16 +02:00
Ricardo Wurmus 5143f3852d
gnu: Add r-biobtreer.
* gnu/packages/bioconductor.scm (r-biobtreer): New variable.
2021-09-07 12:01:10 +02:00
Ricardo Wurmus a59aee1330
gnu: Add r-bgeedb.
* gnu/packages/bioconductor.scm (r-bgeedb): New variable.
2021-09-07 12:01:03 +02:00
Ricardo Wurmus 26da032d5b
gnu: Add r-org-bt-eg-db.
* gnu/packages/bioconductor.scm (r-org-bt-eg-db): New variable.
2021-09-07 12:00:53 +02:00
Ricardo Wurmus af81591375
gnu: Add r-bgeecall.
* gnu/packages/bioconductor.scm (r-bgeecall): New variable.
2021-09-07 11:44:33 +02:00
Ricardo Wurmus 62381dce86
gnu: Add r-beclear.
* gnu/packages/bioconductor.scm (r-beclear): New variable.
2021-09-07 11:44:33 +02:00
Ricardo Wurmus 816d52ba93
gnu: Add r-megadepth.
* gnu/packages/bioconductor.scm (r-megadepth): New variable.
2021-09-06 14:48:24 +02:00