Vagrant Cascadian
|
eb34afe1be
|
gnu: r-circrnaprofiler: Fix grammar.
* gnu/packages/bioconductor.scm (r-circrnaprofiler)[description]:
Remove gratuitous use of "allows to".
|
2021-04-21 08:34:21 -07:00 |
|
Vagrant Cascadian
|
0e434dad70
|
gnu: r-msmstests: Fix typo.
* gnu/packages/bioconductor.scm (r-msmstests)[description]: Fix "This
package" typo.
|
2021-04-21 08:30:47 -07:00 |
hli
|
eb8da54170
|
gnu: Add r-txdb-dmelanogaster-ucsc-dm6-ensgene.
* gnu/packages/bioconductor.scm (r-txdb-dmelanogaster-ucsc-dm6-ensgene):
New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
|
2021-04-12 18:25:40 +02:00 |
Tobias Geerinckx-Rice
|
48358a25ca
|
gnu: r-gagedata: Fix typo in synopsis.
* gnu/packages/bioconductor.scm (r-gagedata)[synopsis]: Fix typo and add
article.
|
2021-04-10 14:11:34 +02:00 |
|
Tobias Geerinckx-Rice
|
04a5e7918d
|
gnu: r-chromstar: Fix typo in description.
* gnu/packages/bioconductor.scm (r-chromstar)[description]: Fix typo.
|
2021-04-10 14:11:32 +02:00 |
|
Tobias Geerinckx-Rice
|
37d4706166
|
gnu: r-msmstests: Fix typos in description.
* gnu/packages/bioconductor.scm (r-msmstests)[description]: Fix typos.
|
2021-04-10 14:11:29 +02:00 |
Ricardo Wurmus
|
e0147aa46f
|
gnu: r-gviz: Update to 1.34.1.
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.34.1.
|
2021-04-08 13:28:24 +02:00 |
|
Ricardo Wurmus
|
14a4c30828
|
gnu: r-universalmotif: Update to 1.8.4.
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.8.4.
|
2021-04-08 13:28:24 +02:00 |
|
Ricardo Wurmus
|
8a7933f37e
|
gnu: r-rsubread: Update to 2.4.3.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.4.3.
|
2021-04-08 13:28:24 +02:00 |
|
Ricardo Wurmus
|
215b0ced02
|
gnu: r-chippeakanno: Update to 3.24.2.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.24.2.
[propagated-inputs]: Add r-dplyr.
|
2021-04-08 13:28:24 +02:00 |
|
Ricardo Wurmus
|
55185f9b3f
|
gnu: r-diffbind: Update to 3.0.15.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.0.15.
|
2021-04-08 13:28:24 +02:00 |
|
Ricardo Wurmus
|
9d2ca98213
|
gnu: r-genomeinfodb: Update to 1.26.6.
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.26.6.
|
2021-04-08 13:28:24 +02:00 |
|
Ricardo Wurmus
|
fb73d7d10d
|
gnu: r-delayedarray: Update to 0.16.3.
* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.16.3.
|
2021-04-08 13:28:23 +02:00 |
zimoun
|
23686ba3eb
|
Revert "Revert some commits that caused `guix pull` to fail."
This reverts commit 8ec0ca8faf.
|
2021-03-31 21:23:45 +02:00 |
|
zimoun
|
9282218508
|
gnu: r-absfiltergsea: Move to (gnu packages bioconductor).
* gnu/packages/cran.scm (r-absfiltergsea): Move this variable from here...
* gnu/packages/bioconductor.scm (r-absfiltergsea): ...to here.
|
2021-03-31 21:23:45 +02:00 |
|
zimoun
|
172b85aa99
|
gnu: r-bisquerna: Move to (gnu packages bioconductor).
* gnu/packages/cran.scm (r-bisquerna): Move this variable from here...
* gnu/packages/bioconductor.scm (r-bisquerna): ...to here.
|
2021-03-31 21:23:45 +02:00 |
|
Hong Li
|
0ff888108a
|
gnu: Add r-chromstar.
* gnu/packages/bioconductor.scm (r-chromstar): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
|
2021-03-22 14:27:13 +01:00 |
|
Hong Li
|
1f958631ef
|
gnu: Add r-chromstardata.
* gnu/packages/bioconductor.scm (r-chromstardata): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
|
2021-03-22 14:26:58 +01:00 |
Leo Famulari
|
8ec0ca8faf
|
Revert some commits that caused `guix pull` to fail.
This reverts commits 821e643921 through
8f9fd9b70c.
Specifically, these commits caused the build failure of
guix-package-cache.drv like this:
------
(repl-version 0 1 1)
Generating package cache for '/gnu/store/vyz7q26kxxd4z70m24rkkqqhaizdla7g-profile'...
(exception unbound-variable (value #f) (value "Unbound variable: ~S") (value (r-biobase)) (value #f))
|
2021-03-15 19:52:34 -04:00 |
|
Ricardo Wurmus
|
8f9fd9b70c
|
gnu: r-biocparallel: Build reproducibly.
* gnu/packages/bioconductor.scm (r-biocparallel)[arguments]: Add phase
"make-reproducible".
|
2021-03-15 23:31:58 +01:00 |
|
zimoun
|
d99a18252c
|
gnu: r-delayedarray: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-delayedarray): Move from here...
* gnu/packages/bioconductor.scm (r-delayedarray): ...to here.
|
2021-03-15 23:30:26 +01:00 |
|
zimoun
|
adf45daae9
|
gnu: r-rsamtools: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-rsamtools): Move from here...
* gnu/packages/bioconductor.scm (r-rsamtools): ...to here.
|
2021-03-15 23:30:26 +01:00 |
|
zimoun
|
b1a19ab6e2
|
gnu: r-biostrings: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-biostrings): Move from here...
* gnu/packages/bioconductor.scm (r-biostrings): ...to here.
|
2021-03-15 23:30:26 +01:00 |
|
zimoun
|
eab9807fb3
|
gnu: r-biocparallel: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-biocparallel): Move from here...
* gnu/packages/bioconductor.scm (r-biocparallel): ...to here.
|
2021-03-15 23:30:26 +01:00 |
|
zimoun
|
c11b541fba
|
gnu: r-biomart: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-biomart): Move from here...
* gnu/packages/bioconductor.scm (r-biomart): ...to here.
|
2021-03-15 23:30:26 +01:00 |
|
zimoun
|
16c7e79ebb
|
gnu: r-annotationdbi: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-annotationdbi): Move from here...
* gnu/packages/bioconductor.scm (r-annotationdbi): ...to here.
|
2021-03-15 23:30:26 +01:00 |
|
zimoun
|
457de7f401
|
gnu: r-biobase: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-biobase): Move from here...
* gnu/packages/bioconductor.scm (r-biobase): ...to here.
|
2021-03-15 23:30:26 +01:00 |
|
zimoun
|
f3f09b99cd
|
gnu: r-genomicranges: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-genomicranges): Move from here...
* gnu/packages/bioconductor.scm (r-genomicranges): ...to here.
|
2021-03-15 23:30:26 +01:00 |
|
zimoun
|
e56b3db82e
|
gnu: r-xvector: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-xvector): Move from here...
* gnu/packages/bioconductor.scm (r-xvector): ...to here.
|
2021-03-15 23:30:26 +01:00 |
|
zimoun
|
821e643921
|
gnu: r-limma: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-limma): Move from here...
* gnu/packages/bioconductor.scm (r-limma): ...to here.
|
2021-03-15 23:30:26 +01:00 |
|
Ricardo Wurmus
|
1ada8ea96c
|
gnu: r-scater: Update to 1.18.6.
* gnu/packages/bioconductor.scm (r-scater): Update to 1.18.6.
|
2021-03-15 15:03:08 +01:00 |
|
Ricardo Wurmus
|
fa6bb614c8
|
gnu: r-cytoml: Update to 2.2.2.
* gnu/packages/bioconductor.scm (r-cytoml): Update to 2.2.2.
[inputs]: Add zlib.
|
2021-03-15 15:03:08 +01:00 |
|
Ricardo Wurmus
|
11dc49afc2
|
gnu: r-diffbind: Update to 3.0.14.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.0.14.
|
2021-03-15 15:03:07 +01:00 |
|
Ricardo Wurmus
|
ee61edb621
|
gnu: r-reportingtools: Update to 2.30.2.
* gnu/packages/bioconductor.scm (r-reportingtools): Update to 2.30.2.
|
2021-03-15 15:03:07 +01:00 |
|
Ricardo Wurmus
|
fa227c9640
|
gnu: r-genomeinfodb: Update to 1.26.4.
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.26.4.
|
2021-03-15 15:03:07 +01:00 |
|
Ricardo Wurmus
|
b45c625f10
|
gnu: r-deseq2: Update to 1.30.1.
* gnu/packages/bioconductor.scm (r-deseq2): Update to 1.30.1.
|
2021-03-15 15:03:07 +01:00 |
|
zimoun
|
bf612ead76
|
gnu: r-variantannotation: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-variantannotation): Move from here...
* gnu/packages/bioconductor.scm (r-variantannotation): ...to here.
|
2021-03-15 14:06:24 +01:00 |
|
zimoun
|
082f3c5433
|
gnu: r-edger: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-edger): Move from here...
* gnu/packages/bioconductor.scm (r-edger): ...to here.
|
2021-03-15 14:06:16 +01:00 |
|
zimoun
|
35b62c044e
|
gnu: r-genomeinfodb: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Move from here...
* gnu/packages/bioconductor.scm (r-genomeinfodb): ...to here.
|
2021-03-15 14:05:56 +01:00 |
|
zimoun
|
8d6d75ff39
|
gnu: r-genomeinfodbdata: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-genomeinfodbdata): Move from here...
* gnu/packages/bioconductor.scm (r-genomeinfodbdata): ...to here.
[source]: Use 'bioconductor-uri'.
|
2021-03-15 14:05:47 +01:00 |
|
zimoun
|
9949f459bf
|
gnu: r-iranges: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-iranges): Move from here...
* gnu/packages/bioconductor.scm (r-iranges): ...to here.
|
2021-03-15 14:05:37 +01:00 |
|
zimoun
|
d64e3a487b
|
gnu: r-s4vectors: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-s4vectors): Move from here...
* gnu/packages/bioconductor.scm (r-s4vectors): ...to here.
|
2021-03-15 14:05:27 +01:00 |
|
zimoun
|
852fa82d4c
|
gnu: r-bioccheck: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-bioccheck): Move from here...
* gnu/packages/bioconductor.scm (r-bioccheck): ...to here.
|
2021-03-15 14:05:22 +01:00 |
|
zimoun
|
d5576b6eb7
|
gnu: r-grohmm: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-grohmm): Move from here...
* gnu/packages/bioconductor.scm (r-grohmm): ...to here.
|
2021-03-15 14:04:26 +01:00 |
|
zimoun
|
5ac55aea8b
|
gnu: r-biocstyle: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-biocstyle): Move from here...
* gnu/packages/bioconductor.scm (r-biocstyle): ...to here.
|
2021-03-15 14:03:21 +01:00 |
|
zimoun
|
134404b437
|
gnu: r-biocviews: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-biocviews): Move from here...
* gnu/packages/bioconductor.scm (r-biocviews): ...to here.
|
2021-03-15 14:03:18 +01:00 |
|
Ricardo Wurmus
|
3eeb7dbf04
|
gnu: r-gkmsvm: Move back to (gnu packages cran).
* gnu/packages/bioconductor.scm (r-gkmsvm): Move this variable from here...
* gnu/packages/cran.scm (r-gkmsvm): ...to here.
|
2021-03-15 12:15:18 +01:00 |
|
zimoun
|
df6b3c25bb
|
gnu: r-systempiper: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-systempiper): Move from here...
* gnu/packages/bioconductor.scm (r-systempiper): ...to here.
|
2021-03-12 14:45:55 +01:00 |
|
zimoun
|
8957efa8ef
|
gnu: r-shortread: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-shortread): Move from here...
* gnu/packages/bioconductor.scm (r-shortread): ...to here.
|
2021-03-12 14:45:54 +01:00 |
|
zimoun
|
2a97057688
|
gnu: r-gostats: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-gostats): Move from here...
* gnu/packages/bioconductor.scm (r-gostats): ...to here.
|
2021-03-12 14:45:54 +01:00 |