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3880 Commits (0ef8fe22ed8985c9656835fc25ab3463d55b6669)

Author SHA1 Message Date
Mathieu Othacehe 73fb14c28a
tests: image: New test.
Add a new image test module to validate the image creation itself. The images
structures are validated using guile-parted. Checking the content of those
images is out of scope and should be performed in other modules (installation
for instance).

* gnu/tests/image.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2022-08-30 19:29:58 +02:00
Marius Bakke 827b4117da
Merge branch 'master' into staging 2022-08-30 18:58:57 +02:00
Marius Bakke 997a51bee8
gnu: mercurial: Update to 6.2.1.
* gnu/packages/version-control.scm (mercurial): Update to 6.2.1.
[source](patches): Add patch for compatibility with OpenSSL 3.0.
[arguments]: Patch /usr/bin/env and /bin/sh unconditionally in all tests.
Disable four more tests.
[inputs]: Change from PYTHON to PYTHON-WRAPPER.
* gnu/packages/patches/mercurial-openssl-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2022-08-30 17:59:18 +02:00
Maxim Cournoyer 0ea62e84a7
services: Add lightdm-service-type.
* gnu/services/lightdm.scm: New service.
* tests/services/lightdm.scm: Test it.
* doc/guix.texi (X Window): Document it.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register it.

Co-authored-by: L p R n d n <guix@lprndn.info>
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2022-08-28 22:28:47 -04:00
Maxim Cournoyer b096b939f7
gnu: lightdm: Apply patch to fix color depth issue with VNC.
* gnu/packages/patches/lightdm-vnc-color-depth.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/display-managers.scm (lightdm): Apply it.
2022-08-28 22:10:20 -04:00
Maxim Cournoyer a4fd1840ab
gnu: lightdm: Apply patch to allow using VNC options.
* gnu/packages/patches/lightdm-arguments-ordering.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/display-managers.scm (lightdm): Apply it.
2022-08-28 22:10:20 -04:00
Maxim Cournoyer da3c784c68
gnu: lightdm: Apply patch to fix a problem with VNC integration.
* gnu/packages/patches/lightdm-vncserver-check.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/display-managers.scm (lightdm): Apply it.
2022-08-28 22:10:20 -04:00
Maxim Cournoyer 6da5eed4e7
gnu: accountsservice: Provide a means to locate extensions.
* gnu/packages/patches/accountsservice-extensions.patch: New patch.
* gnu/packages/freedesktop.scm (accountsservice)[source]: Apply it.
[phases]{wrap-with-xdg-data-dirs}: New phase.
2022-08-28 22:10:18 -04:00
muradm 3c2d2b4538
gnu: security: Add fail2ban-service-type.
* gnu/services/security.scm: New module.
* gnu/tests/security.scm: New module.
* gnu/local.mk: Add new security module and tests.
* doc/guix.text: Add fail2ban-service-type documentation.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2022-08-28 21:46:30 -04:00
Marius Bakke dedbaa3a69
Merge branch 'master' into staging 2022-08-28 15:43:30 +02:00
Marius Bakke 57f8f69562
gnu: gnome-shell: Adjust for polkit 121.
* gnu/packages/patches/gnome-shell-polkit-autocleanup.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/gnome.scm (gnome-shell)[source](patches): New field.
2022-08-28 15:41:49 +02:00
Marius Bakke 59bbf7e86c
gnu: scons: Update to 4.4.0.
* gnu/packages/patches/scons-test-environment.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/build-tools.scm (scons): Update to 4.4.0.
[source](patches): New field.
[arguments]: Adjust bootstrap for the new version.  Enable tests.
[native-inputs]: Add PYTHON-WHEEL and PYTHON-PSUTIL.
(scons-3): New variable.
(scons-python2): Inherit from it.
* gnu/packages/web.scm (serf)[arguments]: Stick with SCONS-3 to prevent rebuilds.
2022-08-27 23:48:56 +02:00
Marius Bakke 290ac5cd1e
gnu: polkit: Update to 121.
* gnu/packages/polkit.scm (polkit-mozjs): Update to 121.
[source](patches): Remove.
[source](snippet): Adjust for build system changes.
[build-system]: Change to MESON-BUILD-SYSTEM.
[inputs]: Replace MOZJS-78 with MOZJS-91.
[native-inputs]: Add GETTEXT-MINIMAL and LIBXML2.
[arguments]: Remove #:phases.  Adjust #:configure-flags for build system
changes.  Use G-expression.
(polkit-duktape)[source]: Remove.
[arguments]: Adjust for build build system changes.
* gnu/packages/patches/polkit-CVE-2021-4034.patch,
gnu/packages/patches/polkit-configure-elogind.patch,
gnu/packages/patches/polkit-use-duktape.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2022-08-27 01:31:23 +02:00
Marius Bakke 1fd262e8d3
Merge branch 'master' into staging 2022-08-27 00:17:57 +02:00
Vagrant Cascadian f31e55d081
gnu: perl-class-methodmaker: Build reproducibly.
* gnu/packages/patches/perl-class-methodmaker-reproducible.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch.
* gnu/packages/perl.scm (perl-class-methodmaker)[source]: Use patch.
2022-08-19 21:17:12 -07:00
Marius Bakke 7e0116740b
gnu: python-mypy: Update to 0.971.
* gnu/packages/patches/python-mypy-12332.patch,
gnu/packages/patches/python-mypy-use-sys-path.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/python-check.scm (python-mypy): Update to 0.971.
[source](patches): Remove.
[arguments]: Skip one test.
2022-08-16 00:43:43 +02:00
Maxime Devos de29a26008
guile-fibers: Backport the ‘epoll instance is dead’ bugfix.
This fixes some indeterministic test failures for gnunet-scheme observed while
developing gnunet-scheme.  The following checks were made:

All dependents compile for x86_64:

$ ./pre-inst-env guix build shepherd gnunet-scheme guix-build-coordinator nar-herder guix-data-service guile-fibers --system=x86_64-linux

Everything except guix-build-coordinator (which depends on the
non-cross-compilable sqitch) cross-compile from x86_64 to aarch64-linux-gnu:

$ ./pre-inst-env guix build shepherd gnunet-scheme nar-herder  guile-fibers --system=x86_64-linux --target=aarch64-linux-gnu

I tried testing for reproducibility but the check phase took to long.
However, you can compare the hash you get against the hash I got:

$ ./pre-inst-env guix hash --serializer=nar $(./pre-inst-env guix build guile-fibers --no-grafts --system=x86_64-linux) 0qsaqx27b6q2s22h7y93417ijpkwl6gc1fhhck8aha6bvmawk5h0

I tried an emulated build for another architecture, but there the tests took
overly long.

There were no lint warnings for guile-fibers.

* gnu/packages/patches/guile-fibers-epoll-instance-is-dead.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register the patch.
* gnu/packages/guile-xyz.scm (guile-fibers)[source]{patches}: Use the patch.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2022-08-15 15:51:27 +02:00
Marius Bakke 431df1214e
gnu: python-dateutil: Adjust tests for Pytest 7.
* gnu/packages/patches/python-dateutil-pytest-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/time.scm (python-dateutil)[source](patches): New field.
2022-08-13 12:28:46 +02:00
Marius Bakke b50eaa6764
Merge branch 'master' into staging 2022-08-11 22:15:22 +02:00
Tom Fitzhenry 6ba74ab29c
gnu: Remove texlive's dependence on ruby-rspec and ruby-byebug.
Motivation: Break the dependency chain from guix to mariadb.

Prior to this patch:

$ guix graph --path guix mariadb
guix@1.3.0-27.598f728
po4a@0.63
texlive-tiny@59745
texlive-latex-base@59745
texlive-hyphen-afrikaans@59745
ruby-hydra@0.0-0.5abfa37
ruby-byebug@11.1.3
ruby-rubocop@1.10.0
ruby-parallel@1.21.0
ruby-mysql2@0.5.2
mariadb@10.5.12

As of this patch:

$ ./pre-inst-env guix graph --path guix mariadb
guix graph: error: no path from 'guix@1.3.0-27.598f728' to 'mariadb@10.5.12'

* gnu/local.mk (dist_patch_DATA): Add texlive-hyph-utf8-no-byebug.patch.
* gnu/packages/patches/texlive-hyph-utf8-no-byebug.patch: New file.
* gnu/packages/tex.scm (hyph-utf8-scripts): Add patch.
(texlive-hyphen-package): Depend on ruby-hydra-minimal.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-08-08 17:26:18 +02:00
Tom Fitzhenry bb907402a6
gnu: Add ruby-hydra-minimal.
* gnu/local.mk (dist_patch_DATA): Add ruby-hydra-minimal-no-byebug.patch.
* gnu/packages/patches/ruby-hydra-minimal-no-byebug.patch: New file.
* gnu/packages/ruby.scm (ruby-hydra): Refactor to inherit from ruby-hydra-minimal.
(ruby-hydra-minimal): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-08-08 17:26:18 +02:00
Marius Bakke 88f976d160
gnu: qtwayland: Fix build with GCC 11.
* gnu/packages/patches/qtwayland-gcc-11.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/qt.scm (qtwayland)[source](patches): New field.
2022-08-11 00:21:11 +02:00
Marius Bakke d8d4b81147
gnu: fuse@2: Prepare for newer glibc.
* gnu/packages/patches/fuse-glibc-2.34.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/linux.scm (fuse)[source](patches): Add the patch.
[arguments]: Add force-bootstrap phase.
[native-inputs]: Add AUTOCONF, AUTOMAKE, GETTEXT-MINIMAL, and LIBTOOL.
2022-08-11 00:21:10 +02:00
Efraim Flashner 9a53a79fc5
gnu: gnupg: Patch CVE-2022-34903.
* gnu/packages/gnupg.scm (gnupg)[replacement]: New field.
(gnupg/replacement): New variable.
* gnu/packages/patches/gnupg-CVE-2022-34903.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2022-08-09 22:39:26 +03:00
Efraim Flashner 468c95e941
gnu: aspell: Patch CVE-2019-25051.
* gnu/packages/aspell.scm (aspell)[source]: Add patch.
* gnu/packages/patches/aspell-CVE-2019-25051.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2022-08-09 22:13:33 +03:00
Efraim Flashner 5e009a8874
gnu: unzip: Patch for CVE-2022-0529 and CVE-2022-0530.
* gnu/packages/compression.scm (unzip)[replacement]: New field.
(unzip/fixed): New variable.
* gnu/packages/patches/unzip-CVE-2022-0529+CVE-2022-0530.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2022-08-08 19:21:45 +03:00
Efraim Flashner 92769ab282
gnu: libtirpc: Fix CVE-2021-46828.
* gnu/packages/onc-rpc.scm (libtirpc)[replacement]: New field.
(libtirpc/fixed): New variable.
(libtirpc-hurd)[source]: Add patch.
* gnu/packages/patches/libtirpc-CVE-2021-46828.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2022-08-07 17:35:58 +03:00
Efraim Flashner 544ff0b6c2
gnu: shishi: Update to 1.0.3.
* gnu/packages/kerberos.scm (shishi): Update to 1.0.3.
[source]: Remove patch.
[arguments]: Remove configure flag overriding libgcrypt detection.
* gnu/packages/patches/shishi-fix-libgcrypt-detection.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2022-08-07 16:16:42 +03:00
vicvbcun 2b34eccbf3
gnu: lrcalc: Update to 2.1.
* gnu/packages/algebra.scm (lrcalc): Update to 2.1.
[source]: Remove patch.
* gnu/packages/patches/lrcalc-includes.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Unregister file.

Signed-off-by: Andreas Enge <andreas@enge.fr>
2022-08-12 10:27:40 +02:00
vicvbcun d5a641dc2e
gnu: lcalc: Update to 2.0.5.
* gnu/packages/sagemath.scm (lcalc): Update to 2.0.5.
* gnu/packages/patches/lcalc-default-parameters-1.patch,
gnu/packages/patches/lcalc-default-parameters-2.patch,
gnu/packages/patches/lcalc-lcommon-h.patch,
gnu/packages/patches/lcalc-using-namespace-std.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Unregister files.

Signed-off-by: Andreas Enge <andreas@enge.fr>
2022-08-12 10:21:00 +02:00
FELŠÖCI Marek b70d6ce627
gnu: mumps: Update to 5.5.1
* gnu/packages/maths.scm (mumps): Update to 5.5.1. Stop applying patches as the build configuration has been updated upstream. Allow for further optimized BLR compression by specifying the -DBLR_MT build option.
* gnu/packages/patches/mumps-build-parallelism.patch: File removed.
* gnu/packages/patches/mumps-shared-libseq.patch: File removed.
* gnu/packages/patches/mumps-shared-mumps.patch: File removed.
* gnu/packages/patches/mumps-shared-pord.patch: File removed.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-08-05 15:28:04 +02:00
Philip McGrath 14a50b62d4
gnu: ruby-anystyle: Initialize dictionary files.
For the GDBM and Marshal dictionary adapters to be useful with their
default settings, we must initialize their data files during the package
build: upstream would initialize them lazily, but that doesn't work with
an immutable installation directory (at least, not without more complex
patches). Otherwise, we would always end up rebuilding the dictionary at
startup, which is “slow” and “not recommended”.

* gnu/packages/patches/ruby-anystyle-fix-dictionary-populate.patch: New
patch.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ruby.scm (ruby-anystyle)[patches]: Use it.
[arguments]<#:phases>: Add 'populate-dictionaries' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-08-04 12:05:52 +02:00
Philip McGrath bc2de56572
gnu: ruby-anystyle-data: Don't write to installed gem.
* gnu/packages/patches/ruby-anystyle-data-immutable-install.patch: New
patch.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ruby.scm (ruby-anystyle-data)[patches]: Use it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-08-04 12:05:52 +02:00
Philip McGrath cc5b8cb3c0
gnu: Add ruby-latex-decode.
* gnu/packages/patches/ruby-latex-decode-fix-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ruby.scm (ruby-latex-decode): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-08-04 12:05:50 +02:00
Sharlatan Hellseher cdff1423c0
gnu: Add aoflagger.
* gnu/packages/astronomy.scm (aoflagger): New variable.
* gnu/packages/patches/aoflagger-use-system-provided-pybind11.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-08-04 12:05:47 +02:00
Timotej Lazar 23cc276aaa
gnu: Add barony.
* gnu/packages/games.scm (barony): New variable.
* gnu/packages/patches/barony-fix-textures.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-08-04 12:05:46 +02:00
John Kehayias a4c131a749
gnu: Add neko.
* gnu/packages/haxe.scm: New module.
(neko): New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add new module.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2022-08-03 14:25:52 +08:00
Vivien Kraus e2ad0b0f8b
gnu: nsis: Update to 3.08.
* gnu/packages/patches/nsis-source-date-epoch.patch: Drop this patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/patches/nsis-env-passthru.patch: Adjust the patch.
* gnu/packages/installers.scm (make-nsis): Update to 3.08.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2022-08-03 14:23:00 +08:00
muradm d7e7494bc4
gnu: Add fail2ban.
* gnu/packages/admin.scm (fail2ban): New variable.
* gnu/packages/patches/fail2ban-0.11.2_CVE-2021-32749.patch,
gnu/packages/patches/fail2ban-0.11.2_fix-setuptools-drop-2to3.patch,
gnu/packages/patches/fail2ban-0.11.2_fix-test-suite.patch,
gnu/packages/patches/fail2ban-paths-guix-conf.patch,
gnu/packages/patches/fail2ban-python310-server-action.patch,
gnu/packages/patches/fail2ban-python310-server-actions.patch,
gnu/packages/patches/fail2ban-python310-server-jails.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2022-08-01 17:20:27 +02:00
Maxim Cournoyer 3a656ea836
gnu: jami: Apply upstream patch that fixes a usability issue.
* gnu/packages/patches/jami-fix-esc-bug.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/jami.scm (%jami-sources): Apply it.
2022-07-31 23:08:51 -04:00
Maxim Cournoyer bdf0fce88e
gnu: libjami: Update to 20220726.1515.da8d1da.
* gnu/packages/patches/jami-fix-crash-on-quit.patch: Delete file.
* gnu/packages/patches/jami-images-loading.patch: Likewise.
* gnu/packages/patches/jami-libclient-audio-managers.patch: Likewise.
* gnu/packages/patches/jami-memory-usage.patch: Likewise.
* gnu/local.mk (dist_patch_DATA): De-register removed patches.
* gnu/packages/jami.scm (%jami-version): Update to 20220726.1515.da8d1da.
(libjami)[configure-flags]: Add '--disable-static'.
(jami-apply-custom-patches): Adjust for top directory renaming.
(%ffmpeg-default-configure-flags): Add muxer support
for g726 and g726le.  Add demuxer support for g723_1, g726 and g726le.  Add
encoder/decoder support for g726, g726le and g723_1.  Add decoder support for
g729.
(ffmpeg-jami)[patches]: Add 'libopusenc-reload-packet-loss-at-encode'.
(jami-libclient)[native-inputs]: New field.
[inputs]: Add ffmpeg-jami and libxkbcommon.
[propagated-inputs]: Replace qtbase-5 with qtbase.
2022-07-31 21:55:49 -04:00
Liliana Marie Prikler 9c02f19d6d
gnu: gst-plugins-good: Update to 1.20.3.
* gnu/packages/gstreamer.scm (gst-plugins-good): Update to 1.20.3.
[source]<patches>: Remove “gst-plugins-good-fix-test.patch”.
[arguments]<#:phases>: Add ‘absolutize-libsoup-library’ and
‘skip-failing-tests’.
* gnu/packages/patches/gst-plugins-good-fix-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2022-07-28 20:30:43 +02:00
Marius Bakke 6611cabd1c
Merge branch 'master' into staging 2022-07-27 12:33:53 +02:00
Antero Mejr ecb91c993d
gnu: libphonenumber: Build reproducibly.
* gnu/packages/messaging.scm (libphonenumber): Add patch.
* gnu/packages/patches/libphonenumber-reproducible-build.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Register patch.

Signed-off-by: Jonathan Brielmaier <jonathan.brielmaier@web.de>
2022-07-27 16:55:22 +02:00
Marius Bakke 7aab4eddd0
gnu: PHP: Fix test failure with newer cURL.
* gnu/packages/patches/php-curl-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/php.scm (php)[source](patches): Add it.
2022-07-23 18:37:57 +02:00
Marius Bakke 8f2be58833
gnu: PHP: Update to 7.4.30.
* gnu/packages/php.scm (php): Update to 7.4.30.
[source](patches): Remove obsolete patch.
* gnu/packages/patches/php-openssl_x509_checkpurpose_basic.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2022-07-23 18:37:57 +02:00
Marius Bakke abea091dbe
Merge branch 'master' into staging 2022-07-21 23:52:47 +02:00
Felix Gruber 17a8a09795
gnu: libgeotiff: Update to 1.7.1.
* gnu/packages/geo.scm (libgeotiff): Update to 1.7.1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-07-18 00:21:31 +02:00
vicvbcun a0f39b7d79
gnu: eigen: Update to 3.4.0.
* gnu/packages/algebra.scm (eigen): Update to 3.4.0.
* gnu/packages/patches/eigen-fix-strict-aliasing-bug.patch: New file.
* gnu/packages/patches/eigen-remove-openmp-error-counting.patch,
gnu/packages/patches/eigen-stabilise-sparseqr-test.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Update accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-07-23 00:39:56 +02:00
Oleg Pykhalov b33e1a183f
services: docker: Fix race condition.
Fixes <https://issues.guix.gnu.org/38432>.

* gnu/packages/patches/containerd-create-pid-file.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add this.
* gnu/packages/docker.scm (containerd)[source]: Add this patch.
* gnu/services/docker.scm
(containerd-shepherd-service): Add #:pid-file and #:pid-file-timeout.
* gnu/services/docker.scm (docker-shepherd-service): Add --containerd flag.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2022-07-13 21:36:41 -04:00
Marius Bakke 4442a5db77
Merge branch 'master' into staging 2022-07-13 23:34:58 +02:00
Nicolas Goaziou f6b18b5372
gnu: emacs-hyperbole: Update to 8.0.0.
* gnu/packages/emacs-xyz.scm (emacs-hyperbole): Update to 8.0.0.
[arguments]<#:include>: Use %default-include.
<#:phases>: Add build fix.
* gnu/packages/patches/emacs-hyperbole-toggle-messaging.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Delete reference to removed file.
2022-07-13 16:02:36 +02:00
Maxim Cournoyer f0c8abe857
gnu: pokerth: Fix build and modernize package.
Fixes <https://issues.guix.gnu.org/51093>.

* gnu/packages/games.scm (pokerth) [source]: Apply patch
[inputs]: Use new style.
[phases]: Delete trailing #t.  Use gexps.
{fix-paths}: Remove the gsasl and libircclient related substitutions.
2022-07-12 11:18:13 -04:00
Reily Siegel 8d922504b2
gnu: home: Add Guix channels service.
* gnu/home/services/guix.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add guix.scm.
* doc/guix.texi: Add documentation for home-channels-service.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-07-12 01:17:46 +02:00
Greg Hogan 3485984a09
gnu: llvm-3.7, llvm-3.8: Fix build with gcc.
* gnu/packages/patches/clang-runtime-3.7-fix-build-with-python3.patch,
gnu/packages/patches/llvm-3.x.1-fix-build-with-gcc.patch: New files.
* gnu/packages/llvm.scm (clang-runtime-3.7, llvm-3.7, llvm-3.8): Use patches.
* gnu/local.mk: Register patches.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-07-12 01:17:45 +02:00
Greg Hogan e5e352ae2a
gnu: llvm-8: Fix build with gcc-10.
* gnu/packages/patches/llvm-8-fix-build-with-gcc-10.patch: New file.
* gnu/packages/llvm.scm (clang-8, clang-runtime-8): Update to 8.0.1.
* gnu/packages/llvm.scm (llvm-8): Use patch and update to 8.0.1.
* gnu/local.mk: Register patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-07-12 01:17:45 +02:00
Efraim Flashner f3e2d1dddf
gnu: xf86-video-mach64: Update to 6.9.7.
* gnu/packages/xorg.scm (xf86-video-mach64): Update to 6.9.7.
[source]: Remove patches.
* gnu/packages/patches/xf86-video-mach64-bool-to-boolean.patch,
gnu/packages/patches/xf86-video-mach64-glibc-2.20.patch: Remove files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2022-07-11 15:13:51 +03:00
Efraim Flashner ca4bfb0f2d
gnu: rust-bootstrap: Add support for riscv64-linux.
* gnu/packages/rust.scm (%mrustc-source): Add patch.
(rust-bootstrap)[native-inputs]: On riscv64-linux add gcc@9:lib.
[supported-systems]: Add riscv64-linux. Adjust comment.
* gnu/packages/patches/mrustc-riscv64-support.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2022-07-10 20:38:59 +03:00
Felix Gruber ca291e4f73
gnu: mia: Build against VTK 9.
* gnu/packages/image-processing.scm (mia): Build against VTK 9.
[inputs]: Remove vtk-7; add vtk.
[source]: Add mia-vtk9.patch.
* gnu/packages/patches/mia-vtk9.patch: New file.
* gnu/local.mk: Add it.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2022-07-07 22:16:11 +01:00
Maxim Cournoyer fa4a9016be
gnu: pitivi: Update to 2022.06.0.
* gnu/packages/patches/pitivi-fix-build-with-meson-0.60.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): De-register it.
* gnu/packages/video.scm (pitivi): Update to 2022.06.0.
[version]: Do not prefix with previous semver version.
[inputs]{gst-plugins/selection}: Add comment about cvtracker.
{python-librosa}: New input.
2022-07-07 12:19:13 -04:00
Efraim Flashner 5cf9a03b7a
gnu: rust: Bootstrap with rust-1.54.0.
* gnu/packages/rust.scm (rust-1.39): Rename to rust-bootstrap. Update to
1.54.0.
[source]: Update snippet to new version. Replace mrustc patch for 1.39.0
with patch for 1.54.0.
[inputs]: Remove libssh2. Replace llvm-9 with llvm. Add gcc-9.
[arguments]: Adjust custom 'setup-mrustc-sources to also create file
with rust version. Adjust custom 'patch-makefiles phase to changes in
mrustc's build steps. Adjust custom 'build phase to follow mrustc's
build steps for rust-1.54.
(rust-1.40): Replace post-bootstrapped rust-1.40 with 1.55.
[arguments]: Add custom 'set-linker-locale-to-utf8 phase. Adjust custom
'build phase. Remove custom 'neuter-tidy phase.
[inputs]: Replace llvm-9 with llvm.
(rust-1.41, rust-1.42, rust-1.43, rust-1.44, rust-1.45, rust-1.46,
rust-1.47, rust-1.48, rust-1.49, rust-1.50, rust-1.51, rust-1.52,
rust-1.53): Remove variables.

* gnu/packages/patches/rust-1.39.0-src.patch: Remove file.
* gnu/packages/patches/rust-1.54.0-src.patch: Add file.
* gnu/local.mk (dist_patch_DATA): Register changes.
2022-07-05 12:52:48 +03:00
Efraim Flashner b56dad9b2c
gnu: tbb: Fix building on riscv64-linux.
* gnu/packages/tbb.scm (tbb)[source]: Add patch.
* gnu/packages/patches/tbb-other-arches.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2022-07-04 11:14:41 +03:00
Efraim Flashner 89fe091bb4
gnu: curl: Fix build on some systems.
* gnu/packages/curl.scm (curl-7.84.0)[source]: Add patch to work around
implicit function declaration.
* gnu/packages/patches/curl-easy-lock.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2022-07-03 10:07:38 +03:00
Jan (janneke) Nieuwenhuizen 36a0ec9e78
gnu: mcrl2: Update to 202206.0.
* gnu/packages/patches/mcrl2-fix-1687.patch,
gnu/packages/patches/mcrl2-fix-counterexample.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/maths.scm (mcrl2): Update to 202206.0 and use them.
2022-07-01 15:45:37 +02:00
Marius Bakke 66e3adcad8
gnu: Remove unused patch.
This is a follow-up to commit fce910af55.

* gnu/packages/patches/postgresql-riscv-spinlocks.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2022-06-24 00:07:32 +02:00
Marius Bakke a6bc7baa54
gnu: freeglut: Update to 3.2.2.
* gnu/packages/gl.scm (freeglut): Update to 3.2.2.
[source](uri): Switch to new primary download location.
[source](patches): Remove.
* gnu/packages/patches/freeglut-gcc-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2022-06-23 19:55:43 +02:00
Maxim Cournoyer 92121b8e9d
gnu: Add phoronix-test-suite.
* gnu/packages/patches/phoronix-test-suite-fsdg.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/benchmark.scm (phoronix-test-suite): New variable.
(gcc-toolchain*): Likewise.
2022-06-22 10:48:37 -04:00
Andreas Enge d13ffd1580
gnu: cmh: Add patch to work with current fplll.
* gnu/packages/patches/cmh-support-fplll.patch: New file.
* gnu/packages/algebra.scm (cmh)[source]: Add patch.
* gnu/local.mk (dist_patch_DATA): Register patch.
2022-06-21 16:12:47 +02:00
Philip McGrath d5a9f2a404
gnu: Add cctools.
* gnu/packages/darwin.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/darwin.scm (cctools): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-19 23:14:56 +02:00
Pierre Langlois 185ae9b410
gnu: docker: Update to 20.10.17.
* gnu/packages/docker.scm (%docker-version): Update to 20.10.17.
(docker-libnetwork)[source]: Update commit according to vendor.conf.  Reset
revision to 1.  Simplify snippet.
(docker)[origin]: Remove docker-fix-tests.patch.
[arguments]: Adapt 'patch-paths phase, substitute "ip6tables" and
buildkit-qemu.  Remove trailing #t.
[native-inputs]: Replace go-1.14 by go.
(docker-cli)[source]: Update hash.
[arguments]: Set GO_LINKMODE to "dynamic".  Remove trailing #t.
[phases]{check}: Replace 'if' with 'when'.
* gnu/packages/networking.scm (go-sctp): Update commit according to
docker-libnetwork's vendor.conf.
* gnu/packages/patches/docker-fix-tests.patch: Delete.
* gnu/local.mk (dist_patch_DATA): Remove patch.

Co-authored-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2022-06-23 23:54:19 -04:00
Ludovic Courtès 7f208f68de
home: Add OpenSSH service.
* gnu/home/services/ssh.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* po/guix/POTFILES.in: Add it.
* doc/guix.texi (Secure Shell): New section.
2022-06-17 23:39:32 +02:00
Thiago Jung Bauermann 861108ca6a
gnu: public-inbox: Fixes to allow the testsuite to run
This patch makes the public-inbox testsuite pass. Some tests are skipped,
so the test coverage could likely be increased with more massaging.

Perhaps the most significant change is using tini to run the testsuite so
that the testsuite's sub-processes are reaped. The ‘check’ phase is based on
the one from the mutter package. Thanks to Maxim Cournoyer for pointing out
this solution.

* gnu/packages/patches/public-inbox-fix-spawn-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add new patch.
* gnu/packages/mail.scm (public-inbox)[source]: Add new patch.
[arguments]<#:tests?>: Remove argument.
<#:imported-modules>: Add argument.
<#:modules>: Likewise.
<#:phases>{qualify-paths}: Substitute path for ‘/bin/cp’.
{pre-check}: Don't skip httpd-unix.t test.  Remove unnecessary path
substitutions for “env” and “/bin/sh”.
{check}: Replace with custom version that launches the tests under tini.
[native-inputs]: Add tini.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-17 15:31:33 +02:00
John Kehayias 67c30ff8ad
gnu: rocm: Update to 5.1.3.
All packages updated at the same time as they have a shared version. rocclr is
no longer a stand-alone package, so the previous version is kept as rocclr-4
and the current version is just the source, rocclr-src, needed by rocm-opencl-runtime.

* gnu/packages/patches/rocm-opencl-runtime-3.10.0-includes.patch,
gnu/packages/patches/rocm-opencl-runtime-4.3-nocltrace.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/patches/rocm-comgr-3.1.0-dependencies.patch,
gnu/packages/patches/rocm-opencl-runtime-4.3-noclinfo.patch,
gnu/packages/patches/rocm-opencl-runtime-4.3-noopencl.patch: Update patches.
* gnu/packages/rocm.scm (rocm-cmake, rocm-device-libs, rocm-comgr,
roct-thunk-interface, rocr-runtime, rocm-opencl-runtime, rocminfo,
rocm-bandwidth-test): Update to 5.1.3.
(roct-thunk-interface)[inputs]: Add libdrm.
[native-inputs]: Add gcc:lib and pkg-config.
(rocclr-src): New variable.
(rocclr-4): New variable (previous version of the package).
(rocm-opencl-runtime)[source]: Remove obsolete patches.
[arguments]: Rewrite with gexps. Add needed #:configure-flags.
[inputs]: Remove rocclr, add numactl.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-16 12:50:06 +02:00
John Kehayias 25809f5a40
gnu: Update llvm-for-rocm: Update to 5.1.3.
* gnu/packages/llvm.scm (llvm-for-rocm): Update to 5.1.3, now based on llvm-14.
[source]{patches}: Remove unneeded patches (add_Object and add_libraries) and add new one (linkdl).
* gnu/packages/patches/llvm-roc-3.0.0-add_libraries.patch,
gnu/packages/patches/llvm-roc-4.2.0-add_Object.patch: Delete files.
* gnu/packages/patches/llvm-roc-5.0.0-linkdl.patch: New file.
* gnu/local.mk (dist_patch_DATA): Update to match current patches.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-16 12:50:06 +02:00
Vinicius Monego 5d28f089ef
gnu: Add python-zeep.
* gnu/packages/python-web.scm (python-zeep): New variable.
* gnu/packages/patches/python-zeep-Fix-pytest_httpx-test-cases.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Co-authored-by: Hartmut Goebel <h.goebel@crazy-compilers.com>
2022-06-16 09:25:55 +02:00
Petr Hodina 887b23a73c
gnu: Add kismet.
* gnu/packages/networking.scm (kismet): New variable.
* gnu/local.mk: Add patch.
* gnu/packages/patches/kismet-unbundle-boost.patch: New file.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2022-06-15 00:25:22 +02:00
Marius Bakke d73b88d826
gnu: TimescaleDB: Update to 2.7.0.
* gnu/packages/databases.scm (timescaledb): Update to 2.7.0.
[source](snippet): Remove more files.
[source](patches): New field.
* gnu/packages/patches/timescaledb-flaky-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2022-06-14 23:33:52 +02:00
Artyom V. Poptsov 4ff9f1689d
gnu: java-commons-lang3: Update to 3.12.0
* gnu/packages/java.scm (java-commons-lang3): Update to 3.12.0.
* gnu/packages/patches/java-commons-lang-fix-dependency.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2022-06-13 22:49:13 +02:00
Andreas Enge 5dec5f65ec
gnu: fplll: Update to 5.4.2.
* gnu/packages/algebra.scm (fplll): Update to 5.4.2.
[source]: Remove patch; for unknown reasons the package now compiles
without it.
* gnu/packages/patches/fplll-std-fenv.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Unregister patch.
2022-06-13 17:16:54 +02:00
Ricardo Wurmus 7846896156
gnu: Add js-mathjax-for-r-mathjaxr.
* gnu/packages/patches/mathjax-3.1.2-no-a11y.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/javascript.scm (js-mathjax-for-r-mathjaxr): New variable.
2022-06-13 12:43:31 +02:00
Ludovic Courtès 622545de6c
Merge branch 'master' into staging 2022-06-12 22:49:47 +02:00
Ludovic Courtès 091eb323ba
Merge branch 'master' into staging 2022-06-08 14:53:16 +02:00
Efraim Flashner 413b85ad4f
gnu: Remove unused patch.
* gnu/packages/patches/python-flake8-polyfill-flake8-4-compat.patch:
Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2022-06-07 19:11:48 +03:00
Efraim Flashner 49a47bdcc5
gnu: python-flake8-polyfill: Fix building with python-flake8@4.
* gnu/packages/python-xyz.scm (python-flake8-polyfill)[source]: Add patch.
* gnu/packages/patches/python-flake8-polyfill-flake8-4-compat.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Register it.
2022-06-07 09:22:35 +03:00
Maxim Cournoyer 85b4dabd94
services: jami: Modernize to adjust to Shepherd 0.9+ changes.
This partially fixes <https://issues.guix.gnu.org/54786>, allowing the 'jami'
and 'jami-provisioning' system tests to pass again.

In version 0.9.0, Shepherd constructors are now run concurrently, via
cooperative scheduling (Guile Fibers).  The Jami service previously relied on
blocking sleeps while polling for D-Bus services to become ready after forking
a process; this wouldn't work anymore since while blocking the service process
wouldn't be given the chance to finish starting.  The new reliance on Fibers
in Shepherd's fork+exec-command in the helper 'send-dbus' procedure also meant
that it wouldn't work outside of Shepherd anymore.  Finally, the
'start-service' Shepherd procedure used in the test suite would cause the Jami
daemon to be spawned multiple times (a bug introduced in Shepherd 0.9.0).

To fix/simplify these problems, this change does the following:

1. Use the Guile AC/D-Bus library for D-Bus communication, which simplify
things, such as avoiding the need to fork 'dbus-send' processes.

2. The non-blocking 'sleep' version of Fiber is used for the 'with-retries'
waiting syntax.

3. A 'dbus' package variant is used to adjust the session bus configuration,
tailoring it for the use case at hand.

4. Avoid start-service in the tests, preferring 'jami-service-available?' for
now.

* gnu/build/jami-service.scm (parse-dbus-reply, strip-quotes)
(deserialize-item, serialize-boolean, dbus-dict->alist)
(dbus-array->list, parse-account-ids, parse-account-details)
(parse-contacts): Delete procedures.
(%send-dbus-binary, %send-dbus-bus, %send-dbus-user, %send-dbus-group)
(%send-dbus-debug): Delete parameters.
(jami-service-running?): New procedure.
(send-dbus/configuration-manager): Rename to...
(call-configuration-manager-method): ... this.  Turn METHOD into a positional
argument.  Turn ARGUMENTS into an optional argument.  Invoke
`call-dbus-method' instead of `send-dbus', adjusting callers accordingly.
(get-account-ids, id->account-details, id->account-details)
(id->volatile-account-details, username->id, add-account remove-account)
(username->contacts, remove-contact, add-contact, set-account-details)
(set-all-moderators, username->all-moderators?, username->moderators)
(set-moderator): Adjust accordingly.
(with-retries, send-dbus, dbus-available-services)
(dbus-service-available?): Move to ...
* gnu/build/dbus-service.scm: ... this new module.
(send-dbus): Rewrite to use the Guile AC/D-Bus library.
(%dbus-query-timeout, sleep*): New variables.
(%current-dbus-connection): New parameter.
(initialize-dbus-connection!, argument->signature-type)
(call-dbus-method): New procedures.
(dbus-available-services): Adjust accordingly.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register new module.
* gnu/packages/glib.scm (dbus-for-jami): New variable.
* gnu/services/telephony.scm: (jami-configuration)[dbus]: Default to
dbus-for-jami.
(jami-dbus-session-activation): Write a D-Bus daemon configuration file at
'/var/run/jami/session-local.conf'.
(jami-shepherd-services): Add the closure of guile-ac-d-bus and guile-fibers
as extensions.  Adjust imported modules.  Remove no longer used parameters.
<jami-dbus-session>: Use a PID file, avoiding the need for the manual
synchronization.
<jami>:  Set DBUS_SESSION_BUS_ADDRESS environment variable.  Poll using
'jami-service-available?' instead of 'dbus-service-available?'.
* gnu/tests/telephony.scm (run-jami-test): Add needed Guile extensions.  Set
DBUS_SESSION_BUS_ADDRESS environment variable.  Adjust all tests to use
'jami-service-available?' to determine if the service is started rather than
the now problematic Shepherd's 'start-service'.
2022-06-10 23:52:33 -04:00
Vagrant Cascadian ce6d8ca443
gnu: ncftp: Build reproducibly.
* gnu/packages/patches/ncftp-reproducible.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch.
* gnu/packages/ftp.scm (ncftp): Add patch.
2022-06-05 20:27:37 -07:00
Tobias Geerinckx-Rice cb475aea08
gnu: alpine: Update to 2.26.
* gnu/packages/mail.scm (alpine): Update to 2.26.
[source]: Remove patch.
* gnu/packages/patches/alpine-fix-privacy-policy-crash.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2022-06-05 02:00:01 +02:00
Liliana Marie Prikler 731f55aa8d
gnu: epiphany: Update to 42.2.
* gnu/packages/gnome.scm (epiphany): Update to 42.2.
[source]: Remove patches.
* gnu/packages/patches/epiphany-update-libportal-usage.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2022-06-08 21:25:20 +02:00
Tobias Geerinckx-Rice ce21522706
gnu: sudo: Update to 1.9.11p1.
* gnu/packages/admin.scm (sudo): Update to 1.9.11p1.
[source]: Remove patch again.
* gnu/packages/patches/sudo-missing-sudo_pt_regs-aarch64.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2022-06-05 02:00:09 +02:00
Tobias Geerinckx-Rice 3783a7b8e4
gnu: nftables: Update to 1.0.4.
* gnu/packages/linux.scm (nftables): Update to 1.0.4.
[source]: Remove patch.
* gnu/packages/patches/nftables-fix-makefile.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2022-06-05 02:00:08 +02:00
Tobias Geerinckx-Rice 5124d0dbe0
gnu: sudo: Fix build on aarch64.
* gnu/packages/admin.scm (sudo)[source]: Add patch.
* gnu/packages/patches/sudo-missing-sudo_pt_regs-aarch64.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2022-06-05 02:00:00 +02:00
Efraim Flashner 64c043e63a
Merge remote-tracking branch 'origin/master' into staging 2022-06-01 12:42:04 +03:00
Maxim Cournoyer f451a8e80c
gnu: openbox: Patch for Python 3.
* gnu/packages/patches/openbox-python3.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/openbox.scm (openbox)[source]: Apply it.
[arguments]: New field.
[propagated-inputs]: Replace python2-pyxdg with python-pyxdg.
[native-inputs]: Replace python-2 with python-wrapper.
Add autoconf, automake, gettext-minimal and libtool.
2022-05-31 14:54:13 -04:00
Maxim Cournoyer b0193c649f
gnu: Remove 4store.
* gnu/packages/databases.scm (4store): Delete variable.
* gnu/packages/patches/4store-fix-buildsystem.patch: Delete file.
* gnu/packages/patches/4store-unset-preprocessor-directive.patch: Likewise.
* gnu/local.mk (dist_patch_DATA): De-register them.
2022-05-31 14:54:11 -04:00
Maxim Cournoyer 5e25a69e6e
gnu: mozjs: Cleanup to only keep the last version.
* gnu/packages/gnuzilla.scm (mozjs): Preserve only the metadata and otherwise
update fields to use those of mozjs-78.
[arguments]: Use gexps.
[phases]: Delete trailing #t.
[native-inputs]: Use new style.
(mozjs-38, mozjs-52, mozjs-60, mozjs-78): Delete variables.
* gnu/packages/patches/mozjs17-aarch64-support.patch
* gnu/packages/patches/mozjs24-aarch64-support.patch
* gnu/packages/patches/mozjs38-pkg-config-version.patch
* gnu/packages/patches/mozjs38-shell-version.patch
* gnu/packages/patches/mozjs38-tracelogger.patch
* gnu/packages/patches/mozjs38-version-detection.patch
* gnu/packages/patches/mozjs60-riscv64-support.patch: Delete patches.
* gnu/local.mk (dist_patch_DATA): De-register them.
* gnu/packages/games.scm (0ad): Adjust accordingly.
* gnu/packages/gnome.scm (gjs): Likewise.
* gnu/packages/polkit.scm (polkit-mozjs): Likewise.
2022-05-31 14:54:10 -04:00
Maxim Cournoyer 54ef40a1f7
gnu: mia: Update to 2.4.7.
* gnu/packages/patches/mia-fix-boost-headers.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/image-processing.scm (mia): Update to 2.4.7.
[source]: Apply patch.
[configure-flags]: Use the more conventional OFF option value (instead of 0).
[inputs]: Use new style.  Replace python2-lxml by python-lxml.  Replace vtk by
vtk-7.
[native-inputs]: Use new style.  Replace python-2 with python-wrapper.
2022-05-31 14:54:07 -04:00
Maxim Cournoyer 887dec8a51
gnu: itk-snap: Fix build.
* gnu/packages/patches/itk-snap-alt-glibc-compat.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/image-processing.scm (itk-snap): Apply it.
[phases]: Delete trailing #t.
[inputs]: Use new style.  Replace vtk-6 with vtk-7.
2022-05-31 14:54:07 -04:00
Maxim Cournoyer 607e48ba3c
gnu: Add vtk-7.
* gnu/packages/image-processing.scm: (vtk-7): New variable.
* gnu/packages/patches/vtk-7-gcc-10-compat.patch: New patch.
* gnu/packages/patches/vtk-7-hdf5-compat.patch: Likewise.
* gnu/packages/patches/vtk-7-python-compat.patch: Likewise.
* gnu/local.mk (dist_patch_DATA): Register them.
2022-05-31 14:54:06 -04:00
Maxim Cournoyer aad73bb58e
gnu: Remove rapicorn.
* gnu/packages/graphics.scm (rapicorn): Delete variable.
* gnu/packages/patches/rapicorn-isnan.patch: Remove patch.
* gnu/local.mk (dist_patch_DATA): De-register it.
2022-05-31 14:54:05 -04:00
Maxim Cournoyer dc71b4f1c6
gnu: breezy: Update to 3.2.2.
* gnu/packages/patches/breezy-fix-gio.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/version-control.scm (breezy): Update to 3.2.2.
[source]{snippet}: Delete pre-generated cythonized C files.
{patches}: Apply patch.
[tests?]: Disable tests.
[phases]{patch-test-shebangs, check}: New phase and override.
[native-inputs]: Add nano, python-cython, python-docutils,
and python-testrepository.
[inputs]: Use new style.  Add python-launchpadlib and python-pygobject.
[description]: Adjust Bazaar URL.
2022-05-31 14:54:02 -04:00
Maxim Cournoyer 88a77bdda1
gnu: Remove python2-pygobject.
* gnu/packages/glib.scm (python2-pygobject, python2-pygobject-2): Delete
variables.
(python-pygobject)[properties]: Delete field.
* gnu/packages/patches/python2-pygobject-2-deprecation.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): De-register it.
* gnu/packages/gnome.scm (libsecret): Remove commented Python 2 inputs.
2022-05-31 14:53:46 -04:00
Maxim Cournoyer edac21bfc7
gnu: Remove wicd.
The last release is from 2017, stuck on Python 2.

* gnu/packages/wicd.scm: Delete file.
* gnu/packages/patches/wicd-bitrate-none-fix.patch: Delete file.
* gnu/packages/patches/wicd-get-selected-profile-fix.patch: Likewise.
* gnu/packages/patches/wicd-urwid-1.3.patch: Likewise.
* gnu/packages/patches/wicd-wpa2-ttls.patch: Likewise.
* gnu/local.mk: De-register them.
* gnu/services/networking.scm: Remove wicd service...
* doc/guix.texi: ... and its documentation.
* gnu/system/linux-container.scm (containerized-operating-system)
<services-to-drop>: Remove wicd-service-type.
2022-05-31 14:53:42 -04:00
Maxim Cournoyer 64c86457db
gnu: Remove python2-subprocess32.
* gnu/packages/python-xyz.scm (python2-subprocess32): Delete variable.
* gnu/packages/patches/python2-subprocess32-disable-input-test.patch: Delete
file.
* gnu/local.mk (dist_patch_DATA): De-register it.
2022-05-31 14:53:39 -04:00
Maxim Cournoyer cfc02804fc
gnu: gourmet: Update to 0.17.4-0-8af29c8 and enable tests.
* gnu/packages/patches/gourmet-sqlalchemy-compat.patch: Add file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/nutrition.scm (gourmet): Update to 0.17.4-0-8af29c8.
[source]: Apply patch.
[python]: Delete argument.
[tests?]: Likewise.
[phases]{prepare-x}: New phase.
{check}: New phase override.
{install-dekstop-file-and-icons}: New phase.
[native-inputs]: Delete python2-distutils-extra, intltool and python2-pygtk.
Add python-dogtail, python-pytest, python-selenium and xorg-server-for-tests.
[inputs]: Delete python2-pygtk, python2-sqlalchemy, python2-lxml,
python2-pillow and python2-elib.intl.
Add gtk+, python-argcomplete, python-beautifulsoup4, python-gst,
python-keyring, python-lxml, python-pillow, python-pycairo, python-pyenchant,
python-pygobject, python-requests, python-scrape-schema-recipe,
python-sqlalchemy.
2022-05-31 14:52:34 -04:00
Maxim Cournoyer 55fc0947d4
gnu: Remove python2-parameterized.
* gnu/packages/check.scm (python2-parameterized): Delete variable.
* gnu/packages/patches/python2-parameterized-docstring-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): De-register it.
2022-05-31 14:52:26 -04:00
Maxim Cournoyer d11d27e2e4
gnu: guile-ac-d-bus: Run test suite.
* gnu/packages/patches/guile-ac-d-bus-fix-tests.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/guile-xyz.scm (guile-ac-d-bus)
[source]: Apply patch.
[phases]{check}: New phase.
[native-inputs]: Add bash-minimal.
2022-05-31 11:20:28 -04:00
yarl baudig 6169c582d1
gnu: emacs-helpful: Update to 0.19
* gnu/packages/patches/emacs-helpful-docstring-test.patch: New file.
* gnu/packages/emacs-xyz.scm (emacs-helpful): Update to 0.19.
[source]: Use the patch.
* gnu/local.mk (dist_patch_DATA): Register the patch.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-05-31 06:16:18 +02:00
Greg Hogan 092ee35155
gnu: casync: Update to 99559cd1.
* gnu/packages/sync.scm (casync): Update to 99559cd1.
[source]: Remove patch.
[arguments]: Fix installation.
[native-inputs]: Add python.
[inputs]: Add eudev.
* gnu/packages/patches/casync-renameat2-declaration.patch: Delete file.
* gnu/local.mk: Remove it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-30 16:34:40 +02:00
Morgan Smith 3f31525546
gnu: GCC: Add cross environment variables patch to GCC 12.
* gnu/packages/patches/gcc-12-cross-environment-variables.patch : New file.
* gnu/local.mk (dist_patch_DATA): Add
gcc-12-cross-environment-variables.patch.
* gnu/packages/cross-base.scm (cross-gcc)[source](patches): Apply the patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-30 16:34:39 +02:00
Efraim Flashner 4259a6516a
gnu: virtuoso-ose: Register patch.
This is a follow-up to 48efbde7a9.

* gnu/local.mk (dist_patch_DATA): Register patch.
2022-05-30 10:42:47 +03:00
Tobias Geerinckx-Rice 64e78659f4
gnu: irrlicht: Update to 1.8.5.
* gnu/packages/games.scm (irrlicht): Update to 1.8.5.
[source]: Use unmodified Debian patches rather than manually maintain
a custom mash-up.
[arguments]: Add a new 'delete-broken-install-rule phase instead.
Don't explicitly return #t from phases.
* gnu/packages/patches/irrlicht-link-against-needed-libs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2022-05-29 02:00:00 +02:00
Vivien Kraus 3695a8d32e
gnu: minetest: Update to 5.5.1.
* gnu/local.mk (dist_patch_DATA): Remove minetest-add-MINETEST_MOD_PATH.patch.
* gnu/packages/minetest.scm (minetest): Update to 5.5.1.
[patches]: Don’t use the patch anymore.
[#:configure-flags]: Point cmake to irrlicht-for-minetest and zstd.
[inputs]: Use irrlicht-for-minetest instead of irrlicht, and add zstd.
(minetest-data): Update hash.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-06-05 12:11:05 +02:00
Efraim Flashner 572bc6d7bd
gnu: Remove unreferenced patch.
This is a follow-up to a08c21f206.

* gnu/packages/patches/libmicrohttpd-0.9.73-test-ssl3.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2022-06-01 22:55:27 +03:00
Ricardo Wurmus 93c97bfffb
gnu: pigx-bsseq: Update to 0.1.7.
* gnu/packages/bioinformatics.scm (pigx-bsseq): Update to 0.1.7.
[source]: Remove patch.
[arguments]: Remove 'autoreconf phase.
[native-inputs]: Remove automake and autoconf.
* gnu/packages/patches/pigx-bsseq-no-citeproc.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove patch.
2022-06-01 12:41:59 +02:00
Ricardo Wurmus 6e54ce9ca9
gnu: pigx-chipseq: Update to 0.1.0.
* gnu/packages/bioinformatics.scm (pigx-chipseq): Update to 0.1.0.
[source]: Remove patch.
[arguments]: Remove 'autoreconf phase.
[native-inputs]: Remove autoconf and automake.
* gnu/packages/patches/pigx-chipseq-no-citeproc.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove patch.
2022-06-01 12:19:48 +02:00
Ludovic Courtès 7097e98586
Merge branch 'master' into staging 2022-05-26 17:11:20 +02:00
Liliana Marie Prikler d37c7f7ad4
gnu: emacs-deferred: Fix wrong number of arguments.
* gnu/packages/patches/emacs-deferred-fix-number-of-arguments.patch: New file.
* gnu/packages/emacs-xyz.scm (emacs-deferred)[patches]: Use it here.
* gnu/local.mk (dist_patch_DATA): Add it here.
2022-05-27 01:49:52 +02:00
Josselin Poiret dab819d5c4
Move (gnu platform) and (gnu platforms ...) to guix/.
* gnu/platform.scm:
* gnu/platforms/arm.scm:
* gnu/platforms/hurd.scm:
* gnu/platforms/mips.scm:
* gnu/platforms/powerpc.scm:
* gnu/platforms/riscv.scm:
* gnu/platforms/s390.scm:
* gnu/platforms/x86.scm: Move to guix/.

* Makefile.am:
* doc/guix.texi (Porting to a New Platform):
* etc/release-manifest.scm:
* gnu/ci.scm:
* gnu/image.scm:
* gnu/local.mk:
* gnu/packages/bioinformatics.scm:
* gnu/packages/bootstrap.scm:
* gnu/packages/cross-base.scm:
* gnu/packages/instrumentation.scm:
* gnu/packages/linux.scm:
* gnu/system/image.scm:
* gnu/system/images/hurd.scm:
* gnu/system/images/novena.scm:
* gnu/system/images/pine64.scm:
* gnu/system/images/pinebook-pro.scm:
* gnu/system/images/rock64.scm:
* guix/scripts/build.scm:
* guix/scripts/system.scm:
* guix/self.scm: Update (gnu platform...) to (guix platform...).

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2022-05-25 09:27:25 +02:00
Tobias Geerinckx-Rice 1290fce44d
gnu: ytnef: Update to 2.0.
* gnu/packages/mail.scm (ytnef): Update to 2.0.
[source]: Remove patches.
* gnu/packages/patches/ytnef-CVE-2021-3403.patch,
gnu/packages/patches/ytnef-CVE-2021-3404.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2022-05-22 02:00:08 +02:00
Ludovic Courtès cdb6b19b5f
gnu: gcc@12: Add missing file.
Fixes <https://issues.guix.gnu.org/55616>.
Reported by Tim Rakowski <tim.rakowski@gmail.com>.

This is a followup to 37e29ccd33.

* gnu/packages/patches/gcc-12-strmov-store-file-names.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2022-05-24 21:53:02 +02:00
Timotej Lazar 3e59d41df0
gnu: sssd: Update to 2.7.0.
Add support for renewing AD membership with adcli. Wrap binaries with
LDB_MODULES_PATH. Fix the sss_analyze utility to run without systemd
libraries. Add native inputs to generate man pages and run additional tests
during build.

* gnu/packages/sssd.scm (sssd): Update to 2.7.0.
[patches]: Drop patches applied upstream. Add a patch for sss_analyze.
[inputs]: Add adcli, bash-minimal, jose, keyutils, libnl, pcre2, python.
Drop augeas, pcre.
[native-inputs]: Add cmocka, doxygen, gettext-minimal, libfaketime,
libtool, openssh, po4a, softhsm.
[arguments]: Rewrite in gexp style. Fix configure checks. Remove static
library from install. Wrap binaries to set correct paths.
* gnu/packages/patches/sssd-collision-with-external-nss-symbol.patch,
gnu/packages/patches/sssd-fix-samba-4.15.3.patch,
gnu/packages/patches/sssd-fix-samba.patch: Delete files.
* gnu/packages/patches/sssd-optional-systemd.patch: New file.
* gnu/local.mk (dist_patch_DATA): Update accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-24 17:19:02 +02:00
Mathieu Othacehe 31f7696be4
platform: Introduce new platforms.
* gnu/platforms/intel.scm: New file.
* gnu/platforms/mips.scm: Ditto.
* gnu/platforms/powerpc.scm: Ditto.
* gnu/platforms/riscv.scm: Ditto.
* gnu/platforms/s390.scm: Ditto.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add them.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2022-05-22 15:15:32 +02:00
Efraim Flashner e5e0e283ff
Merge branch 'master' into staging 2022-05-16 11:14:42 +03:00
Liliana Marie Prikler 22d6e36005
gnu: emacs-yasnippet: Fix build.
* gnu/packages/patches/emacs-yasnippet-fix-tests.patch: New file.
* gnu/packages/emacs-xyz.scm (emacs-yasnippet): Use it here.
* gnu/local.mk (dist_patch_DATA): Register it here.
2022-05-15 03:07:50 +02:00
Vagrant Cascadian de68877a51
gnu: libxmlb: Install xb-tool in bin dir.
* gnu/packages/patches/libxmlb-install-xb-tool-into-bindir.patch: New file.
* gnu/packages/xml.scm (libxmlb)[source]: Add patch.
* gnu/local.mk (dist_patch_DATA): Add patch.
* gnu/packages/diffoscope.scm (diffoscope)[arguments]: Add
  'xb-tool-external-tool phase.
2022-05-14 17:16:32 -07:00
Philip McGrath aefcfdd0ae
guix: Add elm-build-system.
* gnu/packages/patches/elm-offline-package-registry.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/elm.scm (elm): Use it.
* guix/build-system/elm.scm, guix/build/elm-build-system.scm,
tests/elm.scm: New files.
* Makefile.scm (MODULES, SCM_TESTS): Add them.
* doc/guix.texi (Build Systems): Document 'elm-build-system'.
* doc/contributing.texi (Elm Packages): New section. Document naming
conventions and utilities.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-22 01:07:51 +02:00
Philip McGrath 4e99510dea
gnu: elm-compiler: Update to 0.19.1.
* gnu/packages/patches/elm-compiler-disable-reactor.patch,
gnu/packages/patches/elm-compiler-fix-map-key.patch: Delete files.
* gnu/packages/patches/elm-reactor-static-files.patch: New file.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/elm.scm (elm-compiler): Update to 0.19.1.
[origin]<patches>: Remove stale patches. Add new patch.
[arguments]: Use G-expressions. Add #:configure-flags for new patch.
[inputs]: Remove ghc-file-embed. Add ghc-filelock.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-22 01:07:51 +02:00
Zhu Zihao 31a9003d4f
gnu: Add libobjc2.
* gnu/packages/patches/libobjc2-unbundle-robin-map.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add corresponding file entry.
* gnu/packages/gnustep.scm (libobjc2): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-20 20:27:32 +02:00
Liliana Marie Prikler 77a41cb98c
gnu: emacs-ess: Fix build failure.
* gnu/packages/patches/emacs-ess-fix-obsolete-function-alias.patch: New file.
* gnu/packages/statistics.scm (emacs-ess)[source]<patches>: Add it here...
* gnu/local.mk (dist_patch_DATA): ... and here.
2022-05-19 20:31:32 +02:00
Kyle Meyer 5fc5cc2f73
gnu: emacs-lispy: Fix failing test under Emacs 28.
* gnu/packages/patches/emacs-lispy-fix-thread-last-test.patch: New file.
* gnu/packages/emacs-xyz.scm (emacs-lispy): Use it here.
* gnu/local.mk (dist_patch_DATA): Register it here.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2022-05-18 00:16:03 -04:00
Sughosha 5ba12f0176
gnu: gcolor3: Fix build with libportal-0.5.
* gnu/packages/patches/gcolor3-update-libportal-usage.patch: New file.
* gnu/packages/gnome.scm (gcolor3)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-16 15:48:09 +02:00
Liliana Marie Prikler b65a1e4a21
gnu: emacs: Update to 28.1.
* gnu/packages/emacs.scm (emacs): Update to 28.1
* gnu/packages/patches/emacs-exec-path.patch: Adjust accordingly.
* gnu/packages/patches/emacs-ignore-empty-xim-styles.patch: Delete file.
* gnu/local.mk: Remove it here.
2022-05-14 16:13:30 +02:00
Maxim Cournoyer 2576d9ffc4
gnu: python-ipython-documentation: Also build info and pdf targets.
* gnu/packages/patches/python-ipython-documentation-chars.patch: New file.
* gnu/packages/patches/python-ipython-documentation-repro.patch: Likewise.
* gnu/local.mk: Register them.
* gnu/packages/python-xyz.scm (python-ipython-documentation)
[source]: Apply patches.
[arguments]: Use gexps.
[phases]{sanitize-sources}: New phase.
{configure-sphinx-for-xelatex}: Likewise.
{install}: Streamline.  Also build and install the PDF and info manual.
Enable parallel processing.
[inputs]: Delete field.
[propagated-inputs]: Remove texlive-updmap.cfg input.  Add fontconfig,
font-gnu-freefont, graphviz, python-docrepr, texlive-polyglossia,
texlive-bin and texlive-xindy.
2022-05-12 12:45:49 -04:00
Maxim Cournoyer 08199a93c8
gnu: Add python-debugpy.
* gnu/packages/python-xyz.scm (python-debugpy): New variable.
* gnu/packages/patches/python-debugpy-unbundle-pydevd.patch: New file.
* gnu/local.mk: Register it.
2022-05-12 12:45:41 -04:00
Maxim Cournoyer c29f9f72cd
gnu: python-mypy: Update to 0.942 and fix search path.
* gnu/packages/patches/python-mypy-use-sys-path.patch: New patch.
* gnu/local.mk: Register it.
* gnu/packages/python-check.scm (python-mypy): Update to 0.942.
[source]: Apply patch.
2022-05-12 12:45:30 -04:00
Philip McGrath af375c6394
gnu: racket: Update to 8.5.
* gnu/packages/patches/racket-gui-tethered-launcher-backport.patch,
gnu/packages/patches/racket-enable-scheme-backport.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/chez.scm (chez-scheme-for-racket): Update to 9.5.7.6.
* gnu/packages/racket.scm (%racket-version): Update to 8.5.
(%racket-origin)[patches]: Remove obsolete patches.
(racket-vm-common-configure-flags): Correct comment.
(racket)[inputs]<2d, datalog, deinprogramm, draw, drracket, expeditor,
htdp, pict, plot, quickscript, racklog, rackunit, redex, scribble,
typed-racket, string-constants, syntax-color, web-server, xrepl>: Update
checksums.
<gui, srfi>: Likewise, and remove obsolete backports.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-12 10:30:07 +02:00
Ludovic Courtès da3be3ff4f
Merge branch 'master' into staging 2022-05-09 14:44:48 +02:00
Denis 'GNUtoo' Carikli 4d1a88312c
gnu: valgrind: Allow ld.so symbols to be found.
Fixes <https://issues.guix.gnu.org/54728>.

* gnu/packages/valgrind.scm (valgrind/interactive)[native-inputs]:
Add libc:debug
[arguments]: Add patch-default-debuginfo-path phase
[source]: Add patch.
(valgrind-3.18)[source]: Inherit from (package-source valgrind/interactive)
and remove 'patches' field.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2022-05-09 12:26:45 +02:00
Niklas Eklund 51bbcc91b4
gnu: emacs-git-email: Fixes build of package.
* gnu/packages/patches/emacs-git-email-missing-parens.patch: New file.
* gnu/packages/emacs-xyz.scm (emacs-git-email)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2022-05-09 00:07:31 +02:00
Tobias Geerinckx-Rice 388e039044
gnu: isc-dhcp: Update to 4.4.3.
* gnu/packages/admin.scm (isc-dhcp): Update to 4.4.3.
[source]: Remove upstreamed patch.
* gnu/packages/patches/isc-dhcp-gcc-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2022-05-08 02:00:00 +02:00
Tobias Geerinckx-Rice be6d5783ba
gnu: tor: Update to 0.4.7.7.
* gnu/packages/tor.scm (tor): Update to 0.4.7.7.
[source]: Remove patch.
* gnu/packages/patches/tor-sandbox-i686.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2022-05-01 02:00:18 +02:00
Jan (janneke) Nieuwenhuizen 53628d6e3b
gnu: Add dezyne.
* gnu/packages/dezyne.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2022-05-06 14:39:50 +02:00
kiasoc5 253fc14777
gnu: nftables: Update to 1.0.2.
* gnu/packages/patches/nftables-fix-makefile.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (nftables): Update to 1.0.2.
[source]: Add patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-06 10:32:06 +02:00
Michael Rohleder 7727757a73
gnu: ytfzf: Update to 2.3.
* gnu/packages/patches/ytfzf-programs.patch,
* gnu/packages/patches/ytfzf-updates.patch: Delete patches.
* gnu/local.mk (dist_patch_DATA): Unregister them.
* gnu/packages/image-viewers.scm (ytfzf): Update to 2.3.
[source]: Delete patches.
[arguments]: Remove phase 'patch-script. Add phase 'install-addons,
'wrap-program.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-06 10:32:06 +02:00
Paul A. Patience 8b2d266607
gnu: dealii: Update to 9.3.3.
* gnu/packages/maths.scm (dealii): Update to 9.3.3.
* gnu/packages/patches/dealii-fix-compiliation-with-boost-1.78.patch:
Delete file.
* gnu/packages/patches/dealii-fix-sundials.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-03 18:02:28 +02:00
Alexey Abramov 4d3c142e0b
gnu: openssh: Trust Guix store directory
* gnu/local.mk (dist_patch_DATA): Add the patch
* gnu/packages/patches/openssh-trust-guix-store-directory.patch: Patch it
* gnu/packages/ssh.scm (openssh[source]): Use it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-29 00:33:53 +02:00
Zhu Zihao f785299af1
gnu: flatpak: Do not leak GDK_PIXBUF_MODULE_FILE into the sandbox.
Fixes <https://issues.guix.gnu.org/54784>.

* gnu/packages/patches/flatpak-unset-gdk-pixbuf-for-sandbox.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add corresponding entry.
* gnu/packages/package-management.scm (flatpak)[source]: Use patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-28 16:49:08 +02:00
Ludovic Courtès 284fa72649
Merge branch 'master' into staging 2022-04-28 16:24:46 +02:00
pukkamustard ed2e797750
gnu: Add pikchr.
* gnu/packages/pikchr.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-20 23:46:45 +02:00
Eric Bavier 0cf1178a65
gnu: idris: Update to 1.3.4.
* gnu/packages/patches/idris-build-with-haskeline-0.8.patch,
gnu/packages/patches/idris-build-with-megaparsec-9.patch,
gnu/packages/patches/idris-disable-test.patch: Delete patches.
* gnu/local.mk (dist_patch_DATA): Unregister them.
* gnu/packages/idris.scm (idris): Update to 1.3.4.
[source]: Use git-fetch.  Adjust patches.

Co-authored-by: Attila Lendvai <attila@lendvai.name>
2022-04-20 08:35:48 -05:00
Danny Milosavljevic f4dd7bf94e
gnu: openjdk15: Make big cursors work.
* gnu/packages/patches/openjdk-15-xcursor-no-dynamic.patch: New file.
* gnu/local.mk (dist_patch_DATA):  Add it.
* gnu/packages/java.scm (openjdk15)[source]: Add it.
2022-04-18 12:58:57 +02:00
Eric Bavier b5e32d9620
gnu: idris: Fixes test failure.
* gnu/packages/patches/idris-test-ffi008.patch: New file.
* gnu/packages/idris.scm (source): Use it.
* gnu/local.mk (dist_patch_DATA): Register it.
2022-04-13 09:48:04 -05:00
Maxim Cournoyer 4ec7aac483
gnu: webkitgtk: Update to 2.36.0 and enable extra features.
* gnu/packages/webkit.scm (webkitgtk): Update to 2.36.0.
[source]: Remove the webkitgtk-bind-all-fonts.patch and
webkitgtk-canonicalize-paths.patch patches.
[arguments]: Use gexp.
[tests?]: Update comment.
[build-type]: Add explanatory comment.
[configure-flags]: Enable gamepad support,  remove nonexistent
USE_SYSTEMD option and enable mini-browser.
[phases]{do-not-disable-new-dtags}: New phase.
{help-cmake-find-elogind}: Likewise.
{patch-gtk-doc-scan}: Simplify to avoid for-each.  Locate docbookx.dtd via
search-input-file.
{embed-absolute-wpebackend-reference}: Use search-input-file.
[native-inputs]: Use new style.
[inputs]: Likewise.  Add elogind and libmanette.
[description]: Adjust indentation.
(webkitgtk-with-libsoup2): Re-format comment, fixing spacing.
[configure-flags]: Use gexp.
[propagated-inputs]: Use modify-inputs to replace libsoup with
libsoup-minimal-2.
* gnu/packages/patches/webkitgtk-bind-all-fonts.patch: Delete file.
* gnu/packages/patches/webkitgtk-canonicalize-paths.patch: Likewise.
* gnu/local.mk: De-register them.
2022-04-12 23:18:12 -04:00
Philippe SWARTVAGHER 37fa61364e
gnu: hwloc@1: Update to 1.11.13.
* gnu/packages/patches/hwloc-1-test-btrfs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/mpi.scm (hwloc-1): Use it and update to 1.11.13.

Co-authored-by: Ludovic Courtès <ludovic.courtes@inria.fr>
2022-04-11 15:49:32 +02:00
itd b0d3f42372
gnu: efivar: Fix build errors on i686-linux.
* gnu/packages/patches/efivar-211.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (efivar)[source]<origin>: Use it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-10 00:17:40 +02:00
Marius Bakke aa5716703f
gnu: ganeti: Update to 3.0.2.
* gnu/packages/patches/ganeti-haskell-compat.patch,
gnu/packages/patches/ganeti-sphinx-compat.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/virtualization.scm (ganeti): Update to 3.0.2.
[source](patches): Remove obsolete.
[arguments]: Remove obsolete phases.  Disable one more test.
2022-04-09 14:27:43 +02:00
Marius Bakke dce0249f18
gnu: ganeti: Fix test failure with PyYAML 6.0.
This fixes a regression that was introduced in
27720d0fe1.

* gnu/packages/patches/ganeti-pyyaml-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/virtualization.scm (ganeti)[source](patches): Add it.
2022-04-09 14:27:43 +02:00
Marius Bakke e9473ed49b
gnu: LLVM, Clang: Add 14.0.0.
* gnu/packages/llvm.scm (%llvm-monorepo-hashes, %llvm-patches, llvm-monorepo):
New variables.
(clang-runtime-from-llvm): Make HASH optional; use monorepo when not present.
(clang-from-llvm): Likewise.
(llvm-14, clang-runtime-14, clang-14, clang-toolchain-14, lld-14): New variables.
(llvm-13): Inherit from LLVM-14.
(lld-13): Inherit from LLD-14.
(lld): Turn into alias for LLD-14.
* gnu/packages/patches/clang-14.0-libc-search-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/zig.scm (zig): Change from LLD to LLD-13.
2022-04-07 23:12:44 +02:00
Vagrant Cascadian 4a0d045990
gnu: u-boot: Update to 2022.04.
* gnu/packages/bootloaders.scm (u-boot): Update to 2022.01.
  [native-inputs]: Add gnutls, tinfo, libuuid.
  (u-boot-qemu-riscv64-smode): Drop custom
  patches.
* gnu/packages/patches/u-boot-allow-disabling-openssl.patch: Refresh patch.
* gnu/packages/patches/u-boot-riscv64-fix-extlinux.patch: Remove patch,
  applied upstream.
* gnu/local.mk (dist_patch_DATA): Update with removed patches.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-05 12:05:22 -07:00
Felix Gruber c9cca908fa
gnu: python-w3lib: Fix build.
* gnu/packages/python-web.scm (python-w3lib): Fix build.
  [source]: Add python-w3lib-fix-test-failure.patch.
  [arguments]: Use pytest in the 'check phase.
  [native-inputs]: Add python-pytest.
* gnu/packages/patches/python-w3lib-fix-test-failure.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05 20:41:40 +02:00
Ricardo Wurmus 5d1c9fcdcf
gnu: pigx-scrnaseq: Update to 1.1.8.
* gnu/packages/bioinformatics.scm (pigx-scrnaseq): Update to 1.1.8.
[patches]: Remove.
[native-inputs]: Remove.
* gnu/packages/patches/pigx-scrnaseq-no-citeproc.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2022-04-05 18:40:48 +02:00
Zhu Zihao ef3cae59a2
gnu: gtk: Update to 4.6.1.
* gnu/local.mk (dist_patch_DATA): Remove gtk-introspection-test.patch.
* gnu/packages/patches/gtk-introspection-test.patch: Remove.
* gnu/packages/gtk.scm (gtk): Update to 4.6.1.
[source]: Remove stale patch.
[arguments]<phases>: Add 'patch-rst2man' phase, correct the binary name of
rst2man to 'rst2man.py'
[inputs]: Add libjpeg-turbo, libpng, libtiff.
[native-inputs]: Add python-docutils.
[propagated-inputs]: Use pango-next.
* gnu/packages/fcitx5.scm (fcitx5-gtk)[arguments]: Disable GTK4 build.
<configure-flags>: Add "-DENABLE_GTK_IM_MODULE=OFF".
<phases>: In phase "patch-install-prefix", Remove GTK4 code.
[inputs]: Remove package gtk.
[outputs]: Remove output "gtk4".

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-04 22:58:02 +02:00
Danny Milosavljevic 32d1f71593
gnu: xterm: Make big cursors work.
* gnu/packages/patches/xterm-370-explicit-xcursor.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xorg.scm (xterm)[source]: Add it.
[arguments]<#:configure-flags>: Add "-lXcursor".
2022-04-03 13:46:15 +02:00
Efraim Flashner 8b54123a9d
gnu: Add rust-ndarray-0.14.
* gnu/packages/crates-io.scm (rust-ndarray-0.14): New variable.
* gnu/packages/patches/rust-ndarray-0.14-remove-blas-src.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2022-04-03 14:07:48 +03:00
Ricardo Wurmus 6d5964e804
gnu: pigx-sars-cov2-ww: Update to 0.0.5.
* gnu/packages/bioinformatics.scm (pigx-sars-cov2-ww): Update to 0.0.5.
[source]: Remove patch.
[arguments]: Disable tests.
* gnu/packages/patches/pigx-sars-cov2-ww-no-citeproc.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2022-03-29 13:52:16 +02:00
Ricardo Wurmus 847acc3206
gnu: pigx-rnaseq: Update to 0.0.20.
* gnu/packages/bioinformatics.scm (pigx-rnaseq): Update to 0.0.20.
[source]: Remove patch.
[inputs]: Add megadepth.
* gnu/packages/patches/pigx-rnaseq-no-citeproc.patch: Remove patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
2022-03-29 13:52:16 +02:00
Efraim Flashner 738da660ff
gnu: zig: Remove unneeded patch.
* gnu/packages/zig.scm (zig)[source]: Remove one patch.
* gnu/packages/patches/zig-disable-libc-note-test.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2022-03-28 10:31:54 +03:00
Leo Famulari d05fcc21cb
gnu: tremc: Update to 0.9.3.
* gnu/packages/bittorrent.scm (tremc): Update to 0.9.3.
[source]: Remove obsolete patch.
* gnu/packages/patches/tremc-fix-decodestring.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2022-03-24 22:50:20 -04:00
Maxim Cournoyer d8f62653e5
gnu: python-robotframework: Update to 5.0 and run acceptance tests.
* gnu/packages/python-xyz.scm (python-robotframework): Update to 5.0.
[patches]: Remove python-robotframework-ug2html.patch.  Add
python-robotframework-atest.patch and update
python-robotframework-source-date-epoch.patch.
[phases]: Use gexps.
{delete-problematic-tests}: New phase.
{check}: Also run `atest', the acceptance test suite.
[native-inputs]: Use new style.  Add python-lxml, python-pyyaml,
python-xmlschema, scrot and xvfb-run.
* gnu/packages/patches/python-robotframework-atest.patch: New file.
* gnu/packages/patches/python-robotframework-source-date-epoch.patch: Update patch.
* gnu/packages/patches/python-robotframework-ug2html.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2022-03-24 15:43:04 -04:00
Artyom V. Poptsov 02c81a44c6
gnu: avr-xyz: Add simavr
* gnu/packages/avr-xyz.scm: New module.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add 'avr-xyz.scm'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-03-24 12:45:48 +01:00
Maxim Cournoyer 49b350fafc
Merge branch 'master' into staging. 2022-03-21 21:38:19 -04:00
Maxim Cournoyer ad85ca0977
gnu: openboardview: Unbundle imgui.
* gnu/packages/patches/openboardview-use-system-imgui.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/electronics.scm (openboardview)[source]: Delete "imgui"
subdirectory from snippet and apply patch.
[inputs]{imgui}: New input.
2022-03-21 15:30:55 -04:00
itd 2b315fe020
gnu: python-mypy: Fix test errors on i686-linux.
* gnu/packages/patches/python-mypy-12332.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python-check.scm (python-mypy)[source]<origin>: Use patch
"python-mypy-12332.patch" to avoid overflow issues resulting in test failures.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-03-19 23:08:57 +01:00
Nicolas Goaziou 55a680a646
gnu: Add wego.
* gnu/packages/weather.scm: New file.
* gnu/local.mk: Register new file.
2022-03-19 00:56:29 +01:00
Jai Vetrivelan f1aa1f3412
gnu: dunst: Update to 1.8.1.
* gnu/packages/dunst.scm (dunst): Update to 1.8.1.
* gnu/packages/patches/dunst-1.7.3-fix-crash.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-03-16 15:48:52 +01:00
Efraim Flashner bb9b3645e8
gnu: mariadb: Fix building for powerpc-linux.
* gnu/packages/databases.scm (mariadb)[arguments]: Add custom phase for
powerpc-linux to apply patch.
[native-inputs]: When building for powerpc-linux add patch and a patch
file.
* gnu/packages/patches/mariadb-link-libatomic.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2022-03-15 22:20:15 +02:00
Ivan Vilata i Balaguer 4e0c4ab7f9
gnu: transfig: Fix "multiple definition" errors with GCC 10+.
* gnu/packages/patches/transfig-gcc10-fno-common.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xfig.scm (transfig)[source]<origin>: Use patch
"transfig-gcc10-fno-common.patch" to avoid "multiple definition" errors with
GCC 10+ and "-f-no-common".

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-03-11 23:07:25 +01:00
Maxim Cournoyer ebd2093b32
gnu: python-robotframework: Fully build the documentation.
* gnu/packages/patches/python-robotframework-ug2html.patch: New patch.
* gnu/local.mk: Register it.
* gnu/packages/python-xyz.scm (python-robotframework): Apply patch.
[modules]: New argument.
[phases]{build-and-install-doc}: Modify to build the full HTML documentation,
including the user guide.
[native-inputs]: Add python-pygments.
2022-03-09 15:23:36 -05:00
Maxim Cournoyer 1a7424957d
gnu: python-robotframework-sshlibrary: Patch for RobotFramework 5 compatibility.
* gnu/packages/patches/python-robotframework-sshlibrary-rf5-compat.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/python-xyz.scm (python-robotframework-sshlibrary): Apply it.
2022-03-09 15:23:35 -05:00
Philip McGrath 56cf53fb7b
gnu: racket: Update to 8.4.
* gnu/packages/patches/racket-enable-scheme-backport.patch,
gnu/packages/patches/racket-gui-tethered-launcher-backport.patch: New
patches.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/racket.scm (%racket-version, %racket-commit)
(%racket-origin): New variables.
[patches]: Add "racket-enable-scheme-backport.patch".
(racket-minimal): Update to 8.4.
[version]: Use '%racket-version'.
[source]: Use '%racket-origin'.
[inputs]: Add 'ncurses'. Remove 'zlib:static' and 'lz4:static'.
(racket-minimal-bc-3m)[inputs]: Adjust accordingly.
(racket-bootstrap-chez-bootfiles)[version]: Use Chez Scheme's
'(scheme-fork-version-number)'.
(racket)[version]: Use '%racket-version'.
[native-inputs]: Use '%racket-origin'.
[source]: Update to 8.4.
<patches>: Use "racket-gui-tethered-launcher-backport.patch".
<snippet>: Remove "srfi-doc-nonfree".

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-03-04 23:36:58 +01:00
Mathieu Othacehe 3213c37341
gnu: Add barrier.
* gnu/packages/barrier.scm: New file.
* gnu/local.mk: Add it.
2022-03-03 17:38:38 +01:00
Nicolas Goaziou ec7e516116
gnu: rust-pinot-0.1: Update to 0.1.4.
* gnu/packages/crates-io.scm (rust-pinot-0.1): Update to 0.1.4.
* gnu/packages/patches/rust-pinot-0.1-implement-math-table.patch: Remove file.
* gnu/local.mk: Remove reference to the file above.
2022-03-02 23:49:06 +01:00
Brendan Tildesley cda78ec8ac
gnu: Fix typo.
* gnu/local.mk (dist_patch_DATA): Fix typo.

This follows up on commit 6693ff0569.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2022-02-27 01:00:06 +01:00
Nicolas Goaziou 6693ff0569
gnu: tectonic: Update to 0.8.1.
* gnu/packages/rust-apps.scm (tectonic): Update to 0.8.1.
[inputs]: Add FREETYPE, GRAPHITE2, ICU4C, LIBPNG.
* gnu/packages/crates-io.scm (rust-pinot-0.1)[origin]<patches>: Add patch
necessary for Tectonic.
(rust-tectonic-docmodel-0.1): Update to 0.1.2.
(rust-tectonic-engine-spx2html-0.1): New variable.
(rust-tectonic-engine-xetex-0.2): New variable.
(rust-tectonic-engine-xetex-0.1): Remove variable.
(rust-tectonic-io-base-0.4): New variable.
(rust-tectonic-io-base-0.3): Inherit from above.
(rust-tectonic-xdv-0.2): New variable.
(rust-tectonic-xdv-0.1): Remove variable.
* gnu/packages/patches/rust-pinot-0.1-implement-math-table.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register new file.
2022-03-01 23:46:08 +01:00
Ludovic Courtès eabc6af9b8
gnu: guile-ssh: Update to 0.15.1.
* gnu/packages/patches/guile-ssh-fix-test-suite.patch,
gnu/packages/patches/guile-ssh-read-error.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/ssh.scm (guile-ssh): Update to 0.15.1, and remove those
patches.
(guile2.2-ssh)[source]: Remove.
(guile2.0-ssh): Remove.

Co-authored-by: poptsov.artyom@gmail.com (Artyom V. Poptsov)
2022-03-01 12:33:07 +01:00
Ludovic Courtès e9b7adde0d
gnu: guile@3.0.8: Get correct type sizes when cross-compiling.
This works around <https://issues.guix.gnu.org/54198>, whereby
cross-compilation from (say) x86_64-linux to i586-pc-gnu would produce a
broken Guile that crashes at startup.

* gnu/packages/patches/guile-cross-compilation.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/guile.scm (guile-3.0-latest)[source]: Use it.
2022-03-01 12:33:06 +01:00
Efraim Flashner 0306cdd8f5
gnu: screen: Update to 4.9.0.
* gnu/packages/screen.scm (screen): Update to 4.9.0.
[source]: Remove one patch.
[native-inputs]: Remove input labels. Add autoconf, automake.
* gnu/packages/patches/screen-CVE-2021-26937.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2022-02-27 15:01:38 +02:00
Eric Bavier e725b24d11
gnu: evilwm: Update to 1.3.1.
* gnu/packages/wm.scm (evilwm): Update to 1.3.1.
[source]: Remove patch.
* gnu/packages/patches/evilwm-lost-focus-bug.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2022-02-24 22:56:53 -06:00
Maxim Cournoyer b9a4705f80
gnu: webkitgtk: Adjust BubbleWrap wrapper.
This revisits <https://issues.guix.gnu.org/40837> with a fix that doesn't
require to have PULSE_CLIENTCONFIG point to an absolute store location, which
will allow us to revert to have PULSE_CLIENTCONFIG point to a fixed location
under /etc.  This would alleviate the need to reboot to have changes to the
PulseAudio configuration effected.

* gnu/packages/patches/webkitgtk-share-store.patch: Delete file.
* gnu/packages/patches/webkitgtk-bubblewrap-paths.patch: Add file.
* gnu/packages/patches/webkitgtk-canonicalize-paths.patch: Likewise.
* gnu/local.mk (dist_patch_DATA): Update patches list.
* gnu/packages/webkit.scm (webkitgtk)[patches]: Adjust accordingly.
2022-02-24 09:22:54 -05:00
Efraim Flashner 781dd2de23
gnu: postgresql-13: Fix building on riscv64-linux.
* gnu/packages/databases.scm (postgresql-13)[arguments]: Add phase when
buidling for riscv64-linux to apply a patch.
[native-inputs]: When building for riscv64-linux add patch and patch
file.
* gnu/packages/patches/postgresql-riscv-spinlocks.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2022-02-20 12:34:23 +02:00
Marius Bakke 6f22596b1c
gnu: python-pyopenssl: Update to 22.0.0.
* gnu/packages/python-crypto.scm (python-pyopenssl): Update to 22.0.0.
[arguments]: Respect TESTS? in check phase and rewrite in gexp style.
(python2-pyopenssl): Update to 21.0.0.
[source](patches): New field.
* gnu/packages/patches/python2-pyopenssl-openssl-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2022-02-13 15:15:58 +01:00
Marius Bakke 57bfc7233b
gnu: efivar: Update to 38.
* gnu/packages/linux.scm (efivar): Update to 38.
[source](snippet, modules, patches): Remove.
[native-inputs]: Add MANDOC.
(efibootmgr)[source](modules, snippet): New fields.
* gnu/packages/patches/efivar-gcc-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2022-02-19 10:43:22 +01:00
Brendan Tildesley 21fe2ad405
gnu: calibre: Update to 5.36.0.
* gnu/packages/ebook.scm (calibre): Update to 5.36.0.
Remove no longer needed zeroconf patch.
[inputs]: Remove python-dbus, python-dukpy, python-pycryptodome. Add python-jeepney, libstemmer.
* gnu/packages/patches/calibre-fix-zeroconf.patch: Delete patch.
* gnu/local.mk: Remove reference to patch.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-02-19 00:09:42 +01:00
Maxime Devos b3d7eae08e
gnu: upower: Update to 0.99.15.
Upstream has removed the Autotools build system and now
only supports Meson, so the build system has been changed
to 'meson-build-system'.

The patch 'power-builddir.patch' has to be replaced to
adjust to the switch to Meson.  This has been done by adding
an origin snippet.

The origin snippet has been simplified, and for consistency,
it has been made a gexp.

Some dependencies were Autotools-only and could be removed.

* gnu/packages/gnome.scm (upower): Update to 0.99.15.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-02-18 14:14:39 +01:00
Leo Famulari d2bb4847b9
gnu: Remove leftover patch files.
These patches aren't used anywhere in Guix and we forgot to remove them.

* gnu/packages/patches/bash-reproducible-linux-pgrp-pipe.patch,
gnu/packages/patches/ghc-monad-par-fix-tests.patch,
gnu/packages/patches/glibc-CVE-2018-11236.patch,
gnu/packages/patches/glibc-CVE-2018-11237.patch,
gnu/packages/patches/glibc-hurd-magic-pid.patch,
gnu/packages/patches/grocsvs-dont-use-admiral.patch,
gnu/packages/patches/hydra-disable-darcs-test.patch,
gnu/packages/patches/inkscape-poppler-0.76.patch,
gnu/packages/patches/libvirt-create-machine-cgroup.patch,
gnu/packages/patches/linux-libre-arm64-generic-pinebook-lcd.patch,
gnu/packages/patches/marble-qt-add-qt-headers.patch,
gnu/packages/patches/maven-enforcer-api-fix-old-dependencies.patch,
gnu/packages/patches/mescc-tools-boot.patch,
gnu/packages/patches/nettle-3.5-CVE-2021-3580-pt1.patch,
gnu/packages/patches/nettle-3.5-CVE-2021-3580-pt2.patch,
gnu/packages/patches/nettle-3.5-check-_pkcs1_sec_decrypt-msg-len.patch,
gnu/packages/patches/ocaml-Add-a-.file-directive.patch,
gnu/packages/patches/ocaml-CVE-2015-8869.patch,
gnu/packages/patches/ocaml-bitstring-fix-configure.patch,
gnu/packages/patches/ocaml-enable-ocamldoc-reproducibility.patch,
gnu/packages/patches/openbabel-fix-crash-on-nwchem-output.patch,
gnu/packages/patches/openjdk-14-builtins.patch,
gnu/packages/patches/openssl-c-rehash-in.patch,
gnu/packages/patches/openssl-runpath.patch,
gnu/packages/patches/passwordsafe-meson-remove-extra-argument.patch,
gnu/packages/patches/patchutils-test-perms.patch,
gnu/packages/patches/python-CVE-2018-14647.patch,
gnu/packages/patches/python-CVE-2020-26116.patch,
gnu/packages/patches/python-axolotl-AES-fix.patch,
gnu/packages/patches/python-babel-fix-parse-future-test.patch,
gnu/packages/patches/python-matplotlib-run-under-wayland-gtk3.patch,
gnu/packages/patches/python-pytest-asyncio-python-3.8.patch,
gnu/packages/patches/python2-larch-coverage-4.0a6-compatibility.patch,
gnu/packages/patches/qt4-ldflags.patch,
gnu/packages/patches/rust-coresimd-doctest.patch,
gnu/packages/patches/streamlink-update-test.patch,
gnu/packages/patches/tcc-boot-0.9.27.patch,
gnu/packages/patches/vtk-8-fix-freetypetools-build-failure.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2022-02-16 11:57:14 -05:00
Ludovic Courtès 4fa516474b
gnu: nhc98: Build with the current tool chain.
* gnu/packages/patches/nhc98-c-update.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/haskell.scm (nhc98)[source]: Use it.
[arguments]: Remove #:implicit-inputs?.
[native-inputs]: Remove.
2022-02-14 15:52:35 +01:00
Guillaume Le Vaillant 2c9f1c4389
gnu: freecad: Update to 0.19.3-0.09a05a9.
* gnu/packages/engineering.scm (freecad): Update to 0.19.3-0.09a05a9.
  [source]: Remove patches.
  [arguments]: Remove unneeded variables for pyside2 and shiboken2 from
  'configure-flags'.
* gnu/packages/patches/freecad-boost-serialization.patch: Remove file.
* gnu/packages/patches/freecad-vtk9.patch: Remove file.
* gnu/locak.mk (dist_patch_DATA): Remove "freecad-boost-serialization.patch"
  and "freecad-vtk9.patch".
2022-02-14 10:06:04 +01:00
Marius Bakke c71dca05cf
gnu: ungoogled-chromium: Update to 98.0.4758.80-1.
* gnu/packages/patches/ungoogled-chromium-accelerated-video-decode.patch:
Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/chromium.scm (%chromium-version): Set to 98.0.4758.80.
(arch-patch, %arch-patches): Remove variables.
(%guix-patches): Remove accelerated video decode patch which no longer works.
(%ungoogled-origin): Update hash.
(ungoogled-chromium-snippet): Don't apply %ARCH-PATCHES.
(ungoogled-chromium)[source]: Update hash.
[arguments]: Remove obsolete #:configure-flags.  Adjust substitutions.
2022-02-11 23:54:31 +01:00
Ludovic Courtès 2b57d6b6bb
gnu: lokke: Build with Guile 3.0.8.
* gnu/packages/guile.scm (guile-3.0-for-lokke): Remove.
* gnu/packages/patches/guile-3.0.7-psyntax-nil.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/guile-xyz.scm (lokke)[native-inputs]: Replace
GUILE-3.0-FOR-LOKKE by GUILE-3.0-LATEST.
2022-02-11 17:28:01 +01:00
Ricardo Wurmus 7b676317b3
gnu: Add python-pytorch-for-r-torch.
* gnu/packages/patches/python-pytorch-1.9.0-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): New variable.
2022-02-11 15:44:42 +01:00