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2359 Commits (20456fd016a78d396f2a8f0c347de728167f0d99)

Author SHA1 Message Date
Mădălin Ionel Patrașcu 7494f4b4ab
gnu: Add r-agimicrorna.
* gnu/packages/bioconductor.scm (r-agimicrorna): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-05-02 15:23:50 +02:00
Mădălin Ionel Patrașcu 9c19db8c1d
gnu: Add r-adductomicsr.
* gnu/packages/bioconductor.scm (r-adductomicsr): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-05-02 15:17:28 +02:00
Mădălin Ionel Patrașcu 290934c8fc
gnu: Add r-adductdata.
* gnu/packages/bioconductor.scm (r-adductdata): New variable.
2022-05-02 15:17:28 +02:00
Mădălin Ionel Patrașcu 31c9f0e301
gnu: Add r-agilp.
* gnu/packages/bioconductor.scm (r-agilp): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-27 16:35:06 +02:00
Mădălin Ionel Patrașcu 37f584592a
gnu: Add r-aggregatebiovar.
* gnu/packages/bioconductor.scm (r-aggregatebiovar): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-27 16:29:20 +02:00
Mădălin Ionel Patrașcu 73fe0dab50
gnu: Add r-agdex.
* gnu/packages/bioconductor.scm (r-agdex): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-27 16:24:55 +02:00
Mădălin Ionel Patrașcu be2ead3073
gnu: Add r-affyrnadegradation.
* gnu/packages/bioconductor.scm (r-affyrnadegradation): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-27 16:18:27 +02:00
Mădălin Ionel Patrașcu 851770312f
gnu: Add r-affixcan.
* gnu/packages/bioconductor.scm (r-affixcan): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-27 16:07:58 +02:00
Mădălin Ionel Patrașcu 43dc50a5c7
gnu: Add r-adsplit.
* gnu/packages/bioconductor.scm (r-adsplit): New variable.
2022-04-27 16:03:22 +02:00
Mădălin Ionel Patrașcu a45dfa8a73
gnu: Add r-adimpute.
* gnu/packages/bioconductor.scm (r-adimpute): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-27 15:50:53 +02:00
Mădălin Ionel Patrașcu 936f23a654
gnu: Add r-adamgui.
* gnu/packages/bioconductor.scm (r-adamgui): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-26 23:47:54 +02:00
Ricardo Wurmus b79431b5e9
gnu: Add r-lfa.
* gnu/packages/bioconductor.scm (r-lfa): New variable.
2022-04-26 09:48:13 +02:00
Mădălin Ionel Patrașcu 2902adfc7e
gnu: Add r-adam.
* gnu/packages/bioconductor.scm (r-adam): New variable.
2022-04-26 09:48:13 +02:00
Mădălin Ionel Patrașcu b0dd06bd0c
gnu: Add r-xcir.
* gnu/packages/bioconductor.scm (r-xcir): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-14 14:53:17 +02:00
Ricardo Wurmus 919cecd00b
gnu: r-illuminahumanmethylation450kanno-ilmn12-hg19: Move to annotation section.
* gnu/packages/bioconductor.scm (r-illuminahumanmethylation450kanno-ilmn12-hg19):
Move this variable up to the annotation section.
2022-04-14 13:38:30 +02:00
Ricardo Wurmus 03009f2a2b
gnu: r-snplocs-hsapiens-dbsnp144-grch37: Move to annotation section.
* gnu/packages/bioconductor.scm (r-snplocs-hsapiens-dbsnp144-grch37): Move
this variable up to the annotation section.
2022-04-14 13:37:23 +02:00
Ricardo Wurmus c8a6e4abbc
gnu: r-chromvarmotifs: Move to (gnu packages bioinformatics).
* gnu/packages/bioconductor.scm (r-chromvarmotifs): Move this variable from here...
* gnu/packages/bioinformatics.scm (r-chromvarmotifs): ...to here.
2022-04-14 13:35:22 +02:00
Ricardo Wurmus aafd0d2309
gnu: r-absseq: Move out of experiments section.
* gnu/packages/bioconductor.scm (r-absseq): Move definition out of experiments
section.
2022-04-14 13:34:11 +02:00
Ricardo Wurmus ed3697c040
gnu: r-abarray: Move out of experiments section.
* gnu/packages/bioconductor.scm (r-abarray): Move definition out of
experiments section.
2022-04-14 13:32:52 +02:00
Ricardo Wurmus 67941709e2
gnu: r-aneufinder: Move to packages section.
* gnu/packages/bioconductor.scm (r-aneufinder): Move this definition out of
the section for Bioconductor experiments packages.
2022-04-14 13:31:33 +02:00
Mădălin Ionel Patrașcu cab6657094
gnu: Add r-absseq.
* gnu/packages/bioconductor.scm (r-absseq): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-14 13:29:48 +02:00
Mădălin Ionel Patrașcu a436582124
gnu: Add r-abarray.
* gnu/packages/bioconductor.scm (r-abarray): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-14 13:20:07 +02:00
Mădălin Ionel Patrașcu 1b2b1c30e2
gnu: Add r-acde.
* gnu/packages/bioconductor.scm (r-acde): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-14 13:18:07 +02:00
Mădălin Ionel Patrașcu dd9d26bce6
gnu: Add r-wppi.
* gnu/packages/bioconductor.scm (r-wppi): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-14 12:47:24 +02:00
Mădălin Ionel Patrașcu 55be5fc400
gnu: Add r-acme.
* gnu/packages/bioconductor.scm (r-acme): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-14 12:33:27 +02:00
Mădălin Ionel Patrașcu 08df30f232
gnu: Add r-acgh.
* gnu/packages/bioconductor.scm (r-acgh): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-14 11:59:15 +02:00
Mădălin Ionel Patrașcu 839241501a
gnu: Add r-ace.
* gnu/packages/bioconductor.scm (r-ace): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-14 11:50:34 +02:00
Mădălin Ionel Patrașcu 7d990e775e
gnu: r-catalyst: Update description.
* gnu/packages/bioconductor.scm (r-catalyst)[description]: Add Texinfo markup
and clarify a sentence.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-14 11:43:24 +02:00
Ricardo Wurmus d85146c9df
gnu: r-tcgabiolinks: Update to 2.22.4.
* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.22.4.
2022-04-14 11:29:40 +02:00
Ricardo Wurmus 5acc125305
gnu: r-omnipathr: Update to 3.2.8.
* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.2.8.
2022-04-14 11:29:40 +02:00
Ricardo Wurmus 2def20d3ae
gnu: r-bgeedb: Update to 2.20.1.
* gnu/packages/bioconductor.scm (r-bgeedb): Update to 2.20.1.
2022-04-14 11:29:40 +02:00
Ricardo Wurmus c7cb92e494
gnu: r-gviz: Update to 1.38.4.
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.38.4.
2022-04-14 11:29:40 +02:00
Ricardo Wurmus 3c7e190eea
gnu: r-catalyst: Update to 1.18.1.
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.18.1.
2022-04-14 11:29:40 +02:00
Ricardo Wurmus 3e07fbf32a
gnu: r-mscoreutils: Update to 1.6.2.
* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.6.2.
2022-04-14 11:29:40 +02:00
Ricardo Wurmus 40735701a8
gnu: r-singler: Update to 1.8.1.
* gnu/packages/bioconductor.scm (r-singler): Update to 1.8.1.
2022-04-14 11:29:40 +02:00
Ricardo Wurmus 2a71a7b961
gnu: r-s4vectors: Update to 0.32.4.
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.32.4.
2022-04-14 11:29:40 +02:00
Ricardo Wurmus 51ddaf48e8
gnu: r-experimenthub: Update to 2.2.1.
* gnu/packages/bioconductor.scm (r-experimenthub): Update to 2.2.1.
2022-04-14 11:29:39 +02:00
Ricardo Wurmus c9e925d444
gnu: r-universalmotif: Update to 1.12.4.
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.12.4.
2022-04-14 11:29:39 +02:00
Ricardo Wurmus eadb1f53e9
gnu: r-variancepartition: Update to 1.24.1.
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.24.1.
[propagated-inputs]: Add r-aod, r-rdpack, and r-rhpcblasctl.
2022-04-14 11:29:39 +02:00
Ricardo Wurmus 9950ed71fc
gnu: r-cytolib: Update to 2.6.2.
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.6.2.
2022-04-14 11:29:39 +02:00
Ricardo Wurmus 0861d4fff5
gnu: r-rsubread: Update to 2.8.2.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.8.2.
2022-04-14 11:29:39 +02:00
Ricardo Wurmus cb30400097
gnu: r-ropls: Update to 1.26.4.
* gnu/packages/bioconductor.scm (r-ropls): Update to 1.26.4.
2022-04-14 11:29:39 +02:00
Ricardo Wurmus 0c478f50f2
gnu: r-birewire: Update to 3.26.5.
* gnu/packages/bioconductor.scm (r-birewire): Update to 3.26.5.
[propagated-inputs]: Remove r-tsne; add r-rtsne.
2022-04-14 11:29:39 +02:00
Ricardo Wurmus b446be46ba
gnu: r-biocfilecache: Update to 2.2.1.
* gnu/packages/bioconductor.scm (r-biocfilecache): Update to 2.2.1.
2022-04-14 11:29:39 +02:00
Ricardo Wurmus 5576a98b6a
gnu: r-massspecwavelet: Update to 1.60.1.
* gnu/packages/bioconductor.scm (r-massspecwavelet): Update to 1.60.1.
2022-04-14 11:29:39 +02:00
Ricardo Wurmus 6f2d89fb40
gnu: r-atacseqqc: Update to 1.18.1.
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.18.1.
2022-04-14 11:29:39 +02:00
Ricardo Wurmus 88ed3fc340
gnu: r-genomicscores: Update to 2.6.1.
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.6.1.
2022-04-14 11:29:39 +02:00
Ricardo Wurmus e129f579f5
gnu: r-clusterprofiler: Update to 4.2.2.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.2.2.
2022-04-14 11:29:39 +02:00
Ricardo Wurmus 21037105ac
gnu: r-enrichplot: Update to 1.14.2.
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.14.2.
2022-04-14 11:29:38 +02:00
Ricardo Wurmus f8a38e8380
gnu: r-geoquery: Update to 2.62.2.
* gnu/packages/bioconductor.scm (r-geoquery): Update to 2.62.2.
2022-04-14 11:29:38 +02:00